Thomas E. Ferrin

2007
14	EE	John H. Morris, Conrad C. Huang, Patricia C. Babbitt, Thomas E. Ferrin: structureViz: linking Cytoscape and UCSF Chimera. Bioinformatics 23(17): 2345-2347 (2007)
2006
13	EE	Alex S. Nord, Patricia J. Chang, Bruce R. Conklin, Antony V. Cox, Courtney A. Harper, Geoffrey G. Hicks, Conrad C. Huang, Susan J. Johns, Michiko Kawamoto, Songyan Liu, Elaine C. Meng, John H. Morris, Janet Rossant, Patricia Ruiz, William C. Skarnes, Philippe Soriano, William L. Stanford, Doug Stryke, Harald von Melchner, Wolfgang Wurst, Ken-ichi Yamamura, Stephen G. Young, Patricia C. Babbitt, Thomas E. Ferrin: The International Gene Trap Consortium Website: a portal to all publicly available gene trap cell lines in mouse. Nucleic Acids Research 34(Database-Issue): 642-648 (2006)
2005
12	EE	Thomas E. Ferrin, Conrad C. Huang, Daniel M. Greenblatt, Doug Stryke, Kathleen M. Giacomini, John H. Morris: Enhancing Data Sharing in Collaborative Research Projects with DASH. Pacific Symposium on Biocomputing 2005
11	EE	Scott C.-H. Pegg, Shoshana Brown, Sunil Ojha, Conrad C. Huang, Thomas E. Ferrin, Patricia C. Babbitt: Representing Structure-Function Relationships in Mechanistically Diverse Enzyme Superfamilies. Pacific Symposium on Biocomputing 2005
2004
10	EE	Eric F. Pettersen, Thomas D. Goddard, Conrad C. Huang, Gregory S. Couch, Daniel M. Greenblatt, Elaine C. Meng, Thomas E. Ferrin: UCSF Chimera - A visualization system for exploratory research and analysis. Journal of Computational Chemistry 25(13): 1605-1612 (2004)
9		Ursula Pieper, Narayanan Eswar, Hannes Braberg, Mallur S. Madhusudhan, Fred P. Davis, Ashley C. Stuart, Nebojsa Mirkovic, Andrea Rossi, Marc A. Martí-Renom, András Fiser, Ben M. Webb, Daniel M. Greenblatt, Conrad C. Huang, Thomas E. Ferrin, Andrej Sali: MODBASE, a database of annotated comparative protein structure models, and associated resources. Nucleic Acids Research 32(Database-Issue): 217-222 (2004)
2003
8	EE	Doug Stryke, Conrad C. Huang, Michiko Kawamoto, Susan J. Johns, Elaine J. Carlson, Joseph A. Deyoung, Maya K. Leabman, Ira Herskowitz, Kathleen M. Giacomini, Thomas E. Ferrin: SNP Analysis and Presentation in the Pharmacogenetics of Membrane Transporters Project. Pacific Symposium on Biocomputing 2003: 535-547
7		Andrew I. Jewett, Conrad C. Huang, Thomas E. Ferrin: MINRMS: an efficient algorithm for determining protein structure similarity using root-mean-squared-distance. Bioinformatics 19(5): 625-634 (2003)
6		Doug Stryke, Michiko Kawamoto, Conrad C. Huang, Susan J. Johns, Leslie A. King, Courtney A. Harper, Elaine C. Meng, Roy E. Lee, Alice Yee, Larry L'Italien, Pao-Tien Chuang, Stephen G. Young, William C. Skarnes, Patricia C. Babbitt, Thomas E. Ferrin: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Research 31(1): 278-281 (2003)
5		Ranyee A. Chiang, Elaine C. Meng, Conrad C. Huang, Thomas E. Ferrin, Patricia C. Babbitt: The Structure Superposition Database. Nucleic Acids Research 31(1): 505-510 (2003)
2001
4	EE	Thomas E. Ferrin, Bruce A. Foster, Richard Hughey: High Performance Computing for Computational Biology - Session Introduction. Pacific Symposium on Biocomputing 2001: 238-239
1999
3	EE	Thomas E. Ferrin, Eileen Kraemer: Molecules to Maps: Tools for Visualization & Interaction - Session Introduction. Pacific Symposium on Biocomputing 1999: 338-340
1998
2		Eileen Kraemer, Thomas E. Ferrin: Molecules to maps: tools for visualization and interaction in support of computational biology. Bioinformatics 14(9): 764-771 (1998)
1992
1	EE	Thomas E. Ferrin, Conrad C. Huang, Gregory S. Couch, Eric F. Pettersen, Robert Langridge: The MidasPlus molecular modeling system. CHI 1992: 521-522

Coauthor Index

1	Patricia C. Babbitt	[5] [6] [11] [13] [14]
2	Hannes Braberg	[9]
3	Shoshana Brown	[11]
4	Elaine J. Carlson	[8]
5	Patricia J. Chang	[13]
6	Ranyee A. Chiang	[5]
7	Pao-Tien Chuang	[6]
8	Bruce R. Conklin	[13]
9	Gregory S. Couch	[1] [10]
10	Antony V. Cox	[13]
11	Fred P. Davis	[9]
12	Joseph A. Deyoung	[8]
13	Narayanan Eswar	[9]
14	András Fiser	[9]
15	Bruce A. Foster	[4]
16	Kathleen M. Giacomini	[8] [12]
17	Thomas D. Goddard	[10]
18	Daniel M. Greenblatt	[9] [10] [12]
19	Courtney A. Harper	[6] [13]
20	Ira Herskowitz	[8]
21	Geoffrey G. Hicks	[13]
22	Conrad C. Huang	[1] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14]
23	Richard Hughey	[4]
24	Andrew I. Jewett	[7]
25	Susan J. Johns	[6] [8] [13]
26	Michiko Kawamoto	[6] [8] [13]
27	Leslie A. King	[6]
28	Eileen Kraemer	[2] [3]
29	Larry L'Italien	[6]
30	Robert Langridge	[1]
31	Maya K. Leabman	[8]
32	Roy E. Lee	[6]
33	Songyan Liu	[13]
34	Mallur S. Madhusudhan	[9]
35	Marc A. Martí-Renom	[9]
36	Harald von Melchner	[13]
37	Elaine C. Meng	[5] [6] [10] [13]
38	Nebojsa Mirkovic	[9]
39	John H. Morris	[12] [13] [14]
40	Alex S. Nord	[13]
41	Sunil Ojha	[11]
42	Scott C.-H. Pegg	[11]
43	Eric F. Pettersen	[1] [10]
44	Ursula Pieper	[9]
45	Janet Rossant	[13]
46	Andrea Rossi	[9]
47	Patricia Ruiz	[13]
48	Andrej Sali	[9]
49	William C. Skarnes	[6] [13]
50	Philippe Soriano	[13]
51	William L. Stanford	[13]
52	Doug Stryke	[6] [8] [12] [13]
53	Ashley C. Stuart	[9]
54	Ben M. Webb	[9]
55	Wolfgang Wurst	[13]
56	Ken-ichi Yamamura	[13]
57	Alice Yee	[6]
58	Stephen G. Young	[6] [13]

Colors in the list of coauthors