IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 6

Volume 6, Number 1, January 2009

• Dan Gusfield:
  Final, Five-Year End, Editorial. 1-2
  Electronic Edition (ACM DL) BibTeX
• Marie-France Sagot:
  New EIC Editorial. 3
  Electronic Edition (ACM DL) BibTeX
• Daniel H. Huson, Vincent Moulton, Mike A. Steel:
  Special Section: Phylogenetics. 4-6
  Electronic Edition (ACM DL) BibTeX
• Kevin Liu, Serita M. Nelesen, Sindhu Raghavan, C. Randal Linder, Tandy Warnow:
  Barking Up The Wrong Treelength: The Impact of Gap Penalty on Alignment and Tree Accuracy. 7-21
  Electronic Edition (ACM DL) BibTeX
• Bui Quang Minh, Fabio Pardi, Steffen Klaere, Arndt von Haeseler:
  Budgeted Phylogenetic Diversity on Circular Split Systems. 22-29
  Electronic Edition (ACM DL) BibTeX
• Simone Linz, Charles Semple:
  Hybridization in Nonbinary Trees. 30-45
  Electronic Edition (ACM DL) BibTeX
• Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente:
  Metrics for Phylogenetic Networks I: Generalizations of the Robinson-Foulds Metric. 46-61
  Electronic Edition (ACM DL) BibTeX
• Stephen J. Willson:
  Robustness of Topological Supertree Methods for Reconciling Dense Incompatible Data. 62-75
  Electronic Edition (ACM DL) BibTeX
• Elizabeth S. Allman, John A. Rhodes:
  The Identifiability of Covarion Models in Phylogenetics. 76-88
  Electronic Edition (ACM DL) BibTeX
• Frederick A. Matsen III:
  Fourier Transform Inequalities for Phylogenetic Trees. 89-95
  Electronic Edition (ACM DL) BibTeX
• Dan Gusfield:
  Outgoing EIC Editorial for this Special Section of TCBB with the Theme of Phylogenetics. 96
  Electronic Edition (ACM DL) BibTeX
• Stefan Grünewald, Vincent Moulton:
  Maximum Parsimony for Tree Mixtures. 97-102
  Electronic Edition (ACM DL) BibTeX
• Daniel H. Huson:
  Drawing Rooted Phylogenetic Networks. 103-109
  Electronic Edition (ACM DL) BibTeX
• Magnus Bordewich, Olivier Gascuel, Katharina T. Huber, Vincent Moulton:
  Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference. 110-117
  Electronic Edition (ACM DL) BibTeX
• Taoyang Wu, Vincent Moulton, Mike A. Steel:
  Refining Phylogenetic Trees Given Additional Data: An Algorithm Based on Parsimony. 118-125
  Electronic Edition (ACM DL) BibTeX
• Elchanan Mossel, Sébastien Roch, Mike A. Steel:
  Shrinkage Effect in Ancestral Maximum Likelihood. 126-133
  Electronic Edition (ACM DL) BibTeX
• Jianmin Ma, Minh Ngoc Nguyen, Jagath C. Rajapakse:
  Gene Classification Using Codon Usage and Support Vector Machines. 134-143
  Electronic Edition (ACM DL) BibTeX
• Ranjan Maitra:
  Initializing Partition-Optimization Algorithms. 144-157
  Electronic Edition (ACM DL) BibTeX
• Sridharakumar Narasimhan, Raghunathan Rengaswamy, Rajanikanth Vadigepalli:
  Structural Properties of Gene Regulatory Networks: Definitions and Connections. 158-170
  Electronic Edition (ACM DL) BibTeX