2008 |
22 | EE | Ujjwal Maulik,
Anirban Mukhopadhyay,
Sanghamitra Bandyopadhyay,
Michael Q. Zhang,
Xuegong Zhang:
Multiobjective fuzzy biclustering in microarray data: Method and a new performance measure.
IEEE Congress on Evolutionary Computation 2008: 1536-1543 |
21 | EE | Xiaowo Wang,
Jin Gu,
Michael Q. Zhang,
Yanda Li:
Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila species.
Bioinformatics 24(2): 165-171 (2008) |
20 | EE | Hao Lin,
Zefeng Zhang,
Michael Q. Zhang,
Bin Ma,
Ming Li:
ZOOM! Zillions of oligos mapped.
Bioinformatics 24(21): 2431-2437 (2008) |
2007 |
19 | EE | M. Juanita Martinez,
Andrew D. Smith,
Bilan Li,
Michael Q. Zhang,
Kevin S. Harrod:
Computational prediction of novel components of lung transcriptional networks.
Bioinformatics 23(1): 21-29 (2007) |
18 | EE | Bo Jiang,
Michael Q. Zhang,
Xuegong Zhang:
OSCAR: One-class SVM for accurate recognition of cis-elements.
Bioinformatics 23(21): 2823-2828 (2007) |
17 | EE | Jing Zhang,
Bo Jiang,
Ming Li,
John Tromp,
Xuegong Zhang,
Michael Q. Zhang:
Computing exact P-values for DNA motifs.
Bioinformatics 23(5): 531-537 (2007) |
16 | EE | Chaolin Zhang,
Xuegong Zhang,
Michael Q. Zhang,
Yanda Li:
Neighbor number, valley seeking and clustering.
Pattern Recognition Letters 28(2): 173-180 (2007) |
2006 |
15 | EE | Chaolin Zhang,
Hai-Ri Li,
Jian-Bing Fan,
Jessica Wang-Rodriguez,
Tracy Downs,
Xiang-Dong Fu,
Michael Q. Zhang:
Profiling alternatively spliced mRNA isoforms for prostate cancer classification.
BMC Bioinformatics 7: 202 (2006) |
14 | EE | Fang Fang,
Shicai Fan,
Xuegong Zhang,
Michael Q. Zhang:
Predicting methylation status of CpG islands in the human brain.
Bioinformatics 22(18): 2204-2209 (2006) |
2005 |
13 | EE | Andrew D. Smith,
Pavel Sumazin,
Debopriya Das,
Michael Q. Zhang:
Mining ChIP-chip data for transcription factor and cofactor binding sites.
ISMB (Supplement of Bioinformatics) 2005: 403-412 |
12 | EE | Michael Q. Zhang:
Computational Molecular Biology of Genome Expression and Regulation.
PReMI 2005: 31-38 |
11 | EE | Pavel Sumazin,
Gengxin Chen,
Naoya Hata,
Andrew D. Smith,
Theresa Zhang,
Michael Q. Zhang:
DWE: Discriminating Word Enumerator.
Bioinformatics 21(1): 31-38 (2005) |
10 | EE | Dustin E. Schones,
Pavel Sumazin,
Michael Q. Zhang:
Similarity of position frequency matrices for transcription factor binding sites.
Bioinformatics 21(3): 307-313 (2005) |
9 | EE | Fang Zhao,
Zhenyu Xuan,
Lihua Liu,
Michael Q. Zhang:
TRED: a Transcriptional Regulatory Element Database and a platform for in silico gene regulation studies.
Nucleic Acids Research 33(Database-Issue): 103-107 (2005) |
2004 |
8 | EE | Fan Long,
Hong Liu,
Chang S. Hahn,
Pavel Sumazin,
Michael Q. Zhang,
Asher Zilberstein:
Genome-wide prediction and analysis of function-specific transcription factor binding sites.
In Silico Biology 4: (2004) |
2003 |
7 | | Luca Cartegni,
Jinhua Wang,
Zhengwei Zhu,
Michael Q. Zhang,
Adrian R. Krainer:
ESEfinder: a web resource to identify exonic splicing enhancers.
Nucleic Acids Research 31(13): 3568-3571 (2003) |
2001 |
6 | | Theresa Zhang,
Michael Q. Zhang:
Promoter Extraction from GenBank (PEG): automatic extraction of eukaryotic promoter sequences in large sets of genes.
Bioinformatics 17(12): 1232-1233 (2001) |
5 | | Jack E. Tabaska,
Ramana V. Davuluri,
Michael Q. Zhang:
Identifying the 3'-terminal exon in human DNA.
Bioinformatics 17(7): 602-607 (2001) |
2000 |
4 | | Michael Q. Zhang:
Discriminant Analysis and Its Application in DNA Sequence Motif Recognition.
Briefings in Bioinformatics 1(4): 331-342 (2000) |
1999 |
3 | | J. Zhu,
Michael Q. Zhang:
SCPD: a promoter database of the yeast Saccharomyces cerevisiae.
Bioinformatics 15(7): 607-611 (1999) |
2 | EE | Michael Q. Zhang:
Promoter Analysis of Co-regulated Genes in the Yeast Genome.
Computers & Chemistry 23(3-4): 233-250 (1999) |
1993 |
1 | | Michael Q. Zhang,
T. G. Marr:
A weight array method for splicing signal analysis.
Computer Applications in the Biosciences 9(5): 499-509 (1993) |