2005 |
12 | EE | Andrew D. Smith,
Pavel Sumazin,
Debopriya Das,
Michael Q. Zhang:
Mining ChIP-chip data for transcription factor and cofactor binding sites.
ISMB (Supplement of Bioinformatics) 2005: 403-412 |
11 | EE | Pavel Sumazin,
Gengxin Chen,
Naoya Hata,
Andrew D. Smith,
Theresa Zhang,
Michael Q. Zhang:
DWE: Discriminating Word Enumerator.
Bioinformatics 21(1): 31-38 (2005) |
10 | EE | Dustin E. Schones,
Pavel Sumazin,
Michael Q. Zhang:
Similarity of position frequency matrices for transcription factor binding sites.
Bioinformatics 21(3): 307-313 (2005) |
9 | EE | Michael A. Bender,
Martin Farach-Colton,
Giridhar Pemmasani,
Steven Skiena,
Pavel Sumazin:
Lowest common ancestors in trees and directed acyclic graphs.
J. Algorithms 57(2): 75-94 (2005) |
2004 |
8 | EE | Fan Long,
Hong Liu,
Chang S. Hahn,
Pavel Sumazin,
Michael Q. Zhang,
Asher Zilberstein:
Genome-wide prediction and analysis of function-specific transcription factor binding sites.
In Silico Biology 4: (2004) |
7 | EE | Steven Skiena,
Pavel Sumazin:
Shift error detection in standardized exams.
J. Discrete Algorithms 2(2): 313-331 (2004) |
2003 |
6 | EE | Vinhthuy T. Phan,
Steven Skiena,
Pavel Sumazin:
A Model for Analyzing Black-Box Optimization.
WADS 2003: 424-438 |
5 | EE | Andy Wildenberg,
Steven Skiena,
Pavel Sumazin:
Deconvolving Sequence Variation in Mixed DNA Populations.
Journal of Computational Biology 10(3/4): 635-652 (2003) |
2002 |
4 | EE | Vinhthuy T. Phan,
Pavel Sumazin,
Steven Skiena:
A Time-Sensitive System for Black-Box Combinatorial Optimization.
ALENEX 2002: 16-18 |
3 | EE | Andy Wildenberg,
Steven Skiena,
Pavel Sumazin:
Deconvolving sequence variation in mixed DNA populations.
RECOMB 2002: 311-320 |
2001 |
2 | EE | Michael A. Bender,
Giridhar Pemmasani,
Steven Skiena,
Pavel Sumazin:
Finding least common ancestors in directed acyclic graphs.
SODA 2001: 845-854 |
2000 |
1 | EE | Steven Skiena,
Pavel Sumazin:
Shift Error Detection in Standardized Exams.
CPM 2000: 264-276 |