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John D. Westbrook

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2008
20EEKatherine G. Herbert, Junilda Spirollari, Jason Tsong-Li Wang, William H. Piel, John D. Westbrook, Winona C. Barker, Zhang-Zhi Hu, Cathy H. Wu: Bioinformatic Databases. Wiley Encyclopedia of Computer Science and Engineering 2008
19EEKim Henrick, Zukang Feng, Wolfgang Bluhm, Dimitris Dimitropoulos, Jurgen F. Doreleijers, Shuchismita Dutta, Judith L. Flippen-Anderson, John M. C. Ionides, Chisa Kamada, Eugene Krissinel, Catherine L. Lawson, John L. Markley, Haruki Nakamura, Richard Newman, Yukiko Shimizu, Jawahar Swaminathan, Sameer Velankar, Jeramia Ory, Eldon L. Ulrich, Wim Vranken, John D. Westbrook, Reiko Yamashita, Huanwang Yang, Jasmine Young, Muhammed Yousufuddin, Helen M. Berman: Remediation of the protein data bank archive. Nucleic Acids Research 36(Database-Issue): 426-433 (2008)
2006
18EEAndrei Kouranov, Lei Xie, Joanna de la Cruz, Li Chen, John D. Westbrook, Philip E. Bourne, Helen M. Berman: The RCSB PDB information portal for structural genomics. Nucleic Acids Research 34(Database-Issue): 302-305 (2006)
2005
17EEJohn D. Westbrook, Nobutoshi Ito, Haruki Nakamura, Kim Henrick, Helen M. Berman: PDBML: the representation of archival macromolecular structure data in XML. Bioinformatics 21(7): 988-992 (2005)
16EERasmus H. Fogh, Wayne Boucher, Wim F. Vranken, Anne Pajon, Tim J. Stevens, T. N. Bhat, John D. Westbrook, John M. C. Ionides, Ernest D. Laue: A framework for scientific data modeling and automated software development. Bioinformatics 21(8): 1678-1684 (2005)
15EENita Deshpande, Kenneth J. Addess, Wolfgang Bluhm, Jeffrey C. Merino-Ott, Wayne Townsend-Merino, Qing Zhang, Charlie Knezevich, Lie Xie, Li Chen, Zukang Feng, Rachel Kramer Green, Judith L. Flippen-Anderson, John D. Westbrook, Helen M. Berman, Philip E. Bourne: The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema. Nucleic Acids Research 33(Database-Issue): 233-237 (2005)
2004
14EEPhilip E. Bourne, C. K. J. Allerston, Werner G. Krebs, Wilfred W. Li, Ilya N. Shindyalov, Adam Godzik, Iddo Friedberg, Tong Liu, David L. Wild, Seungwoo Hwang, Zoubin Ghahramani, Li Chen, John D. Westbrook: The Status of Structural Genomics Defined Through the Analysis of Current Targets and Structures. Pacific Symposium on Biocomputing 2004: 375-386
13EEZukang Feng, Li Chen, Himabindu Maddula, Ozgur Akcan, Rose Oughtred, Helen M. Berman, John D. Westbrook: Ligand Depot: a data warehouse for ligands bound to macromolecules. Bioinformatics 20(13): 2153-2155 (2004)
12EELi Chen, Rose Oughtred, Helen M. Berman, John D. Westbrook: TargetDB: a target registration database for structural genomics projects. Bioinformatics 20(16): 2860-2862 (2004)
11 Philip E. Bourne, John D. Westbrook, Helen M. Berman: The Protein Data Bank and lessons in data management. Briefings in Bioinformatics 5(1): 23-30 (2004)
10 Philip E. Bourne, Kenneth J. Addess, Wolfgang Bluhm, Li Chen, Nita Deshpande, Zukang Feng, Ward Fleri, Rachel Kramer Green, Jeffrey C. Merino-Ott, Wayne Townsend-Merino, Helge Weissig, John D. Westbrook, Helen M. Berman: The distribution and query systems of the RCSB Protein Data Bank. Nucleic Acids Research 32(Database-Issue): 223-225 (2004)
2003
9 John D. Westbrook, Zukang Feng, Li Chen, Huanwang Yang, Helen M. Berman: The Protein Data Bank and structural genomics. Nucleic Acids Research 31(1): 489-491 (2003)
8 Huanwang Yang, Fabrice Jossinet, Neocles Leontis, Li Chen, John D. Westbrook, Helen M. Berman, Eric Westhof: Tools for the automatic identification and classification of RNA base pairs. Nucleic Acids Research 31(13): 3450-3460 (2003)
7EEHelen M. Berman, John D. Westbrook: The Need for Dictionaries, Ontologies, and Controlled Vocabularies. OMICS 7(1): 9-10 (2003)
2002
6 Douglas S. Greer, John D. Westbrook, Philip E. Bourne: An ontology driven architecture for derived representations of macromolecular structure. Bioinformatics 18(9): 1280-1281 (2002)
5 John D. Westbrook, Zukang Feng, Shri Jain, T. N. Bhat, Narmada Thanki, Veerasamy Ravichandran, Gary Gilliland, Wolfgang Bluhm, Helge Weissig, Douglas S. Greer, Philip E. Bourne, Helen M. Berman: The Protein Data Bank: unifying the archive. Nucleic Acids Research 30(1): 245-248 (2002)
2001
4 T. N. Bhat, Philip E. Bourne, Zukang Feng, Gary Gilliland, Shri Jain, Veerasamy Ravichandran, Bohdan Schneider, Kata Schneider, Narmada Thanki, Helge Weissig, John D. Westbrook, Helen M. Berman: The PDB data uniformity project. Nucleic Acids Research 29(1): 214-218 (2001)
2000
3 John D. Westbrook, Philip E. Bourne: STAR/mmCIF: An ontology for macromolecular structure. Bioinformatics 16(2): 159-168 (2000)
2 Helen M. Berman, John D. Westbrook, Zukang Feng, Gary Gilliland, T. N. Bhat, Helge Weissig, Ilya N. Shindyalov, Philip E. Bourne: The Protein Data Bank. Nucleic Acids Research 28(1): 235-242 (2000)
1992
1EEAnnankoil R. Srinivasan, John D. Westbrook, Wilma K. Olson: An Interactive FORTRAN Program for Three-dimensional Molecular Visualization. Computers & Chemistry 16(3): 265-266 (1992)

Coauthor Index

1Kenneth J. Addess [10] [15]
2Ozgur Akcan [13]
3C. K. J. Allerston [14]
4Winona C. Barker [20]
5Helen M. Berman [2] [4] [5] [7] [8] [9] [10] [11] [12] [13] [15] [17] [18] [19]
6T. N. Bhat [2] [4] [5] [16]
7Wolfgang Bluhm [5] [10] [15] [19]
8Wayne Boucher [16]
9Philip E. Bourne [2] [3] [4] [5] [6] [10] [11] [14] [15] [18]
10Li Chen [8] [9] [10] [12] [13] [14] [15] [18]
11Joanna de la Cruz [18]
12Nita Deshpande [10] [15]
13Dimitris Dimitropoulos [19]
14Jurgen F. Doreleijers [19]
15Shuchismita Dutta [19]
16Zukang Feng [2] [4] [5] [9] [10] [13] [15] [19]
17Ward Fleri [10]
18Judith L. Flippen-Anderson [15] [19]
19Rasmus H. Fogh [16]
20Iddo Friedberg [14]
21Zoubin Ghahramani [14]
22Gary Gilliland [2] [4] [5]
23Adam Godzik [14]
24Rachel Kramer Green [10] [15]
25Douglas S. Greer [5] [6]
26Kim Henrick [17] [19]
27Katherine G. Herbert [20]
28Zhang-Zhi Hu [20]
29Seungwoo Hwang [14]
30John M. C. Ionides [16] [19]
31Nobutoshi Ito [17]
32Shri Jain [4] [5]
33Fabrice Jossinet [8]
34Chisa Kamada [19]
35Charlie Knezevich [15]
36Andrei Kouranov [18]
37Werner G. Krebs [14]
38Eugene Krissinel [19]
39Ernest D. Laue [16]
40Catherine L. Lawson [19]
41Neocles Leontis [8]
42Wilfred W. Li [14]
43Tong Liu [14]
44Himabindu Maddula [13]
45John L. Markley [19]
46Jeffrey C. Merino-Ott [10] [15]
47Haruki Nakamura [17] [19]
48Richard Newman [19]
49Wilma K. Olson [1]
50Jeramia Ory [19]
51Rose Oughtred [12] [13]
52Anne Pajon [16]
53William H. Piel [20]
54Veerasamy Ravichandran [4] [5]
55Bohdan Schneider [4]
56Kata Schneider [4]
57Yukiko Shimizu [19]
58Ilya N. Shindyalov [2] [14]
59Junilda Spirollari [20]
60Annankoil R. Srinivasan [1]
61Tim J. Stevens [16]
62Jawahar Swaminathan [19]
63Narmada Thanki [4] [5]
64Wayne Townsend-Merino [10] [15]
65Eldon L. Ulrich [19]
66Sameer Velankar [19]
67Wim Vranken [19]
68Wim F. Vranken [16]
69Jason Tsong-Li Wang (Jason T. L. Wang) [20]
70Helge Weissig [2] [4] [5] [10]
71Eric Westhof [8]
72David L. Wild [14]
73Cathy H. Wu [20]
74Lei Xie [18]
75Lie Xie [15]
76Reiko Yamashita [19]
77Huanwang Yang [8] [9] [19]
78Jasmine Young [19]
79Muhammed Yousufuddin [19]
80Qing Zhang [15]

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Copyright © Sun May 17 03:24:02 2009 by Michael Ley (ley@uni-trier.de)