2008 |
15 | EE | Kosuke Hashimoto,
Kiyoko F. Aoki-Kinoshita,
Nobuhisa Ueda,
Minoru Kanehisa,
Hiroshi Mamitsuka:
A new efficient probabilistic model for mining labeled ordered trees applied to glycobiology.
TKDD 2(1): (2008) |
2006 |
14 | EE | Kiyoko F. Aoki-Kinoshita,
Nobuhisa Ueda,
Hiroshi Mamitsuka,
Minoru Kanehisa:
ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains.
ISMB (Supplement of Bioinformatics) 2006: 25-34 |
13 | EE | Kosuke Hashimoto,
Kiyoko F. Aoki-Kinoshita,
Nobuhisa Ueda,
Minoru Kanehisa,
Hiroshi Mamitsuka:
A new efficient probabilistic model for mining labeled ordered trees.
KDD 2006: 177-186 |
2005 |
12 | EE | Nobuhisa Ueda,
Kiyoko F. Aoki-Kinoshita,
Atsuko Yamaguchi,
Tatsuya Akutsu,
Hiroshi Mamitsuka:
A Probabilistic Model for Mining Labeled Ordered Trees: Capturing Patterns in Carbohydrate Sugar Chains.
IEEE Trans. Knowl. Data Eng. 17(8): 1051-1064 (2005) |
11 | EE | Pierre Mahé,
Nobuhisa Ueda,
Tatsuya Akutsu,
Jean-Luc Perret,
Jean-Philippe Vert:
Graph Kernels for Molecular Structure-Activity Relationship Analysis with Support Vector Machines.
Journal of Chemical Information and Modeling 45(4): 939-951 (2005) |
2004 |
10 | EE | Pierre Mahé,
Nobuhisa Ueda,
Tatsuya Akutsu,
Jean-Luc Perret,
Jean-Philippe Vert:
Extensions of marginalized graph kernels.
ICML 2004 |
9 | EE | Kiyoko F. Aoki,
Nobuhisa Ueda,
Atsuko Yamaguchi,
Minoru Kanehisa,
Tatsuya Akutsu,
Hiroshi Mamitsuka:
Application of a new probabilistic model for recognizing complex patterns in glycans.
ISMB/ECCB (Supplement of Bioinformatics) 2004: 6-14 |
8 | EE | Nobuhisa Ueda,
Kiyoko F. Aoki,
Hiroshi Mamitsuka:
A General Probabilistic Framework for Mining Labeled Ordered Trees.
SDM 2004 |
7 | EE | Jose C. Nacher,
Nobuhisa Ueda,
Takuji Yamada,
Minoru Kanehisa,
Tatsuya Akutsu:
Clustering under the line graph transformation: application to reaction network.
BMC Bioinformatics 5: 207 (2004) |
6 | EE | Hiroto Saigo,
Jean-Philippe Vert,
Nobuhisa Ueda,
Tatsuya Akutsu:
Protein homology detection using string alignment kernels.
Bioinformatics 20(11): 1682-1689 (2004) |
5 | | Kiyoko F. Aoki,
Atsuko Yamaguchi,
Nobuhisa Ueda,
Tatsuya Akutsu,
Hiroshi Mamitsuka,
Susumu Goto,
Minoru Kanehisa:
KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains.
Nucleic Acids Research 32(Web-Server-Issue): 267-272 (2004) |
4 | EE | Kiyoko F. Aoki,
Nobuhisa Ueda,
Atsuko Yamaguchi,
Tatsuya Akutsu,
Minoru Kanehisa,
Hiroshi Mamitsuka:
Managing and Analyzing Carbohydrate Data.
SIGMOD Record 33(2): 33-38 (2004) |
2003 |
3 | | Morihiro Hayashida,
Nobuhisa Ueda,
Tatsuya Akutsu:
Inferring strengths of protein-protein interactions from experimental data using linear programming.
ECCB 2003: 58-65 |
2001 |
2 | EE | Nobuhisa Ueda,
Taisuke Sato:
Simplified Training Algorithms for Hierarchical Hidden Markov Models.
Discovery Science 2001: 401-415 |
1999 |
1 | EE | Yoshitaka Kameya,
Nobuhisa Ueda,
Taisuke Sato:
A Graphical Method for Parameter Learning of Symbolic-Statistical Models.
Discovery Science 1999: 264-276 |