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Shaun Mahony

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2008
10EEObi L. Griffith, Stephen Montgomery, Bridget Bernier, Bryan Chu, Katayoon Kasaian, Stein Aerts, Shaun Mahony, Monica C. Sleumer, Mikhail Bilenky, Maximilian Haeussler, Malachi Griffith, Steven M. Gallo, Belinda Giardine, Bart Hooghe, Peter Van Loo, Enrique Blanco, Amy Ticoll, Stuart Lithwick, Elodie Portales-Casamar, Ian J. Donaldson, Gordon Robertson, Claes Wadelius, Pieter J. De Bleser, Dominique Vlieghe, Marc S. Halfon, Wyeth W. Wasserman, Ross C. Hardison, Casey M. Bergman, Steven J. M. Jones: ORegAnno: an open-access community-driven resource for regulatory annotation. Nucleic Acids Research 36(Database-Issue): 107-113 (2008)
2007
9EEShaun Mahony, Philip E. Auron, Panayiotis V. Benos: Inferring protein-DNA dependencies using motif alignments and mutual information. ISMB/ECCB (Supplement of Bioinformatics) 2007: 297-304
8EEShaun Mahony, Panayiotis V. Benos: STAMP: a web tool for exploring DNA-binding motif similarities. Nucleic Acids Research 35(Web-Server-Issue): 253-258 (2007)
2006
7EENigel McCoy, Shaun Mahony, Aaron Golden: Gene Prediction in Metagenomic Libraries Using the Self Organising Map and High Performance Computing Techniques. GCCB 2006: 99-109
6EEShaun Mahony, Panayiotis V. Benos, Terry J. Smith, Aaron Golden: Self-organizing neural networks to support the discovery of DNA-binding motifs. Neural Networks 19(6-7): 950-962 (2006)
2005
5EEShaun Mahony, Aaron Golden, Terry J. Smith, Panayiotis V. Benos: Improved detection of DNA motifs using a self-organized clustering of familial binding profiles. ISMB (Supplement of Bioinformatics) 2005: 283-291
4EEShaun Mahony, David Hendrix, Terry J. Smith, Aaron Golden: Self-Organizing Maps of Position Weight Matrices for Motif Discovery in Biological Sequences. Artif. Intell. Rev. 24(3-4): 397-413 (2005)
3EEShaun Mahony, David Hendrix, Aaron Golden, Terry J. Smith, Daniel S. Rokhsar: Transcription factor binding site identification using the self-organizing map. Bioinformatics 21(9): 1807-1814 (2005)
2004
2EEShaun Mahony, James O. McInerney, Terry J. Smith, Aaron Golden: Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models. BMC Bioinformatics 5: 23 (2004)
2003
1EEShaun Mahony, Terry J. Smith, James O. McInerney, Aaron Golden: A New Approach to Gene Prediction Using the Self-Organizing Map. CSB 2003: 444-445

Coauthor Index

1Stein Aerts [10]
2Philip E. Auron [9]
3Panayiotis V. Benos [5] [6] [8] [9]
4Casey M. Bergman [10]
5Bridget Bernier [10]
6Mikhail Bilenky [10]
7Enrique Blanco [10]
8Pieter J. De Bleser [10]
9Bryan Chu [10]
10Ian J. Donaldson [10]
11Steven M. Gallo [10]
12Belinda Giardine [10]
13Aaron Golden [1] [2] [3] [4] [5] [6] [7]
14Malachi Griffith [10]
15Obi L. Griffith [10]
16Maximilian Haeussler [10]
17Marc S. Halfon [10]
18Ross C. Hardison [10]
19David Hendrix [3] [4]
20Bart Hooghe [10]
21Steven J. M. Jones [10]
22Katayoon Kasaian [10]
23Stuart Lithwick [10]
24Peter Van Loo [10]
25Nigel McCoy [7]
26James O. McInerney [1] [2]
27Stephen Montgomery [10]
28Elodie Portales-Casamar [10]
29Gordon Robertson [10]
30Daniel S. Rokhsar [3]
31Monica C. Sleumer [10]
32Terry J. Smith [1] [2] [3] [4] [5] [6]
33Amy Ticoll [10]
34Dominique Vlieghe [10]
35Claes Wadelius [10]
36Wyeth W. Wasserman [10]

Colors in the list of coauthors

Copyright © Sun May 17 03:24:02 2009 by Michael Ley (ley@uni-trier.de)