Shaun Mahony

2008
10	EE	Obi L. Griffith, Stephen Montgomery, Bridget Bernier, Bryan Chu, Katayoon Kasaian, Stein Aerts, Shaun Mahony, Monica C. Sleumer, Mikhail Bilenky, Maximilian Haeussler, Malachi Griffith, Steven M. Gallo, Belinda Giardine, Bart Hooghe, Peter Van Loo, Enrique Blanco, Amy Ticoll, Stuart Lithwick, Elodie Portales-Casamar, Ian J. Donaldson, Gordon Robertson, Claes Wadelius, Pieter J. De Bleser, Dominique Vlieghe, Marc S. Halfon, Wyeth W. Wasserman, Ross C. Hardison, Casey M. Bergman, Steven J. M. Jones: ORegAnno: an open-access community-driven resource for regulatory annotation. Nucleic Acids Research 36(Database-Issue): 107-113 (2008)
2007
9	EE	Shaun Mahony, Philip E. Auron, Panayiotis V. Benos: Inferring protein-DNA dependencies using motif alignments and mutual information. ISMB/ECCB (Supplement of Bioinformatics) 2007: 297-304
8	EE	Shaun Mahony, Panayiotis V. Benos: STAMP: a web tool for exploring DNA-binding motif similarities. Nucleic Acids Research 35(Web-Server-Issue): 253-258 (2007)
2006
7	EE	Nigel McCoy, Shaun Mahony, Aaron Golden: Gene Prediction in Metagenomic Libraries Using the Self Organising Map and High Performance Computing Techniques. GCCB 2006: 99-109
6	EE	Shaun Mahony, Panayiotis V. Benos, Terry J. Smith, Aaron Golden: Self-organizing neural networks to support the discovery of DNA-binding motifs. Neural Networks 19(6-7): 950-962 (2006)
2005
5	EE	Shaun Mahony, Aaron Golden, Terry J. Smith, Panayiotis V. Benos: Improved detection of DNA motifs using a self-organized clustering of familial binding profiles. ISMB (Supplement of Bioinformatics) 2005: 283-291
4	EE	Shaun Mahony, David Hendrix, Terry J. Smith, Aaron Golden: Self-Organizing Maps of Position Weight Matrices for Motif Discovery in Biological Sequences. Artif. Intell. Rev. 24(3-4): 397-413 (2005)
3	EE	Shaun Mahony, David Hendrix, Aaron Golden, Terry J. Smith, Daniel S. Rokhsar: Transcription factor binding site identification using the self-organizing map. Bioinformatics 21(9): 1807-1814 (2005)
2004
2	EE	Shaun Mahony, James O. McInerney, Terry J. Smith, Aaron Golden: Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models. BMC Bioinformatics 5: 23 (2004)
2003
1	EE	Shaun Mahony, Terry J. Smith, James O. McInerney, Aaron Golden: A New Approach to Gene Prediction Using the Self-Organizing Map. CSB 2003: 444-445

Coauthor Index

1	Stein Aerts	[10]
2	Philip E. Auron	[9]
3	Panayiotis V. Benos	[5] [6] [8] [9]
4	Casey M. Bergman	[10]
5	Bridget Bernier	[10]
6	Mikhail Bilenky	[10]
7	Enrique Blanco	[10]
8	Pieter J. De Bleser	[10]
9	Bryan Chu	[10]
10	Ian J. Donaldson	[10]
11	Steven M. Gallo	[10]
12	Belinda Giardine	[10]
13	Aaron Golden	[1] [2] [3] [4] [5] [6] [7]
14	Malachi Griffith	[10]
15	Obi L. Griffith	[10]
16	Maximilian Haeussler	[10]
17	Marc S. Halfon	[10]
18	Ross C. Hardison	[10]
19	David Hendrix	[3] [4]
20	Bart Hooghe	[10]
21	Steven J. M. Jones	[10]
22	Katayoon Kasaian	[10]
23	Stuart Lithwick	[10]
24	Peter Van Loo	[10]
25	Nigel McCoy	[7]
26	James O. McInerney	[1] [2]
27	Stephen Montgomery	[10]
28	Elodie Portales-Casamar	[10]
29	Gordon Robertson	[10]
30	Daniel S. Rokhsar	[3]
31	Monica C. Sleumer	[10]
32	Terry J. Smith	[1] [2] [3] [4] [5] [6]
33	Amy Ticoll	[10]
34	Dominique Vlieghe	[10]
35	Claes Wadelius	[10]
36	Wyeth W. Wasserman	[10]

Colors in the list of coauthors