| 2007 |
|---|
| 12 | EE | Pere Puigbò,
Santiago Garcia-Vallvé,
James O. McInerney:
TOPD/FMTS: a new software to compare phylogenetic trees.
Bioinformatics 23(12): 1556-1558 (2007) |
| 11 | EE | Thomas M. Keane,
Thomas J. Naughton,
James O. McInerney:
MultiPhyl: a high-throughput phylogenomics webserver using distributed computing.
Nucleic Acids Research 35(Web-Server-Issue): 33-37 (2007) |
| 2006 |
|---|
| 10 | EE | Thomas M. Keane,
Andrew J. Page,
Thomas J. Naughton,
Simon A. A. Travers,
James O. McInerney:
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines.
Algorithmica 45(3): 285-300 (2006) |
| 2005 |
|---|
| 9 | EE | Thomas M. Keane,
Andrew J. Page,
James O. McInerney,
Thomas J. Naughton:
A High-Throughput Bioinformatics Distributed Computing Platform.
CBMS 2005: 377-382 |
| 8 | EE | C. J. Creevey,
James O. McInerney:
Clann: investigating phylogenetic information through supertree analyses.
Bioinformatics 21(3): 390-392 (2005) |
| 7 | EE | Thomas M. Keane,
Thomas J. Naughton,
Simon A. A. Travers,
James O. McInerney,
G. P. McCormack:
DPRml: distributed phylogeny reconstruction by maximum likelihood.
Bioinformatics 21(7): 969-974 (2005) |
| 2004 |
|---|
| 6 | EE | Shaun Mahony,
James O. McInerney,
Terry J. Smith,
Aaron Golden:
Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models.
BMC Bioinformatics 5: 23 (2004) |
| 2003 |
|---|
| 5 | EE | Shaun Mahony,
Terry J. Smith,
James O. McInerney,
Aaron Golden:
A New Approach to Gene Prediction Using the Self-Organizing Map.
CSB 2003: 444-445 |
| 4 | | C. J. Creevey,
James O. McInerney:
CRANN: detecting adaptive evolution in protein-coding DNA sequences.
Bioinformatics 19(13): 1726 (2003) |
| 2002 |
|---|
| 3 | EE | Thomas M. Keane,
Richard Allen,
Thomas J. Naughton,
James O. McInerney,
John Waldron:
Distributed Java Platform with Programmable MIMD Capabilities.
FIDJI 2002: 122-131 |
| 2 | EE | Thomas M. Keane,
Richard Allen,
Thomas J. Naughton,
James O. McInerney,
John Waldron:
Distributed computing for DNA analysis.
PPPJ/IRE 2002: 65-70 |
| 1998 |
|---|
| 1 | | James O. McInerney:
GCUA: general codon usage analysis.
Bioinformatics 14(4): 372-373 (1998) |
