Jesús A. Izaguirre

2008
22	EE	Faruck Morcos, Charles Lamanna, Marcin Sikora, Jesús A. Izaguirre: Cytoprophet: a Cytoscape plug-in for protein and domain interaction networks inference. Bioinformatics 24(19): 2265-2266 (2008)
21	EE	Justin M. Wozniak, Paul Brenner, Douglas Thain, Aaron Striegel, Jesús A. Izaguirre: Making the best of a bad situation: Prioritized storage management in GEMS. Future Generation Comp. Syst. 24(1): 10-16 (2008)
20	EE	Paul Brenner, Justin M. Wozniak, Douglas Thain, Aaron Striegel, J. W. Peng, Jesús A. Izaguirre: Biomolecular committor probability calculation enabled by processing in network storage. Parallel Computing 34(11): 652-660 (2008)
2007
19	EE	Trevor M. Cickovski, Chris Sweet, Jesús A. Izaguirre: MDL, A Domain-Specific Language for Molecular Dynamics. Annual Simulation Symposium 2007: 256-266
18	EE	Paul Brenner, Justin M. Wozniak, Douglas Thain, Aaron Striegel, J. W. Peng, Jesús A. Izaguirre: Biomolecular Path Sampling Enabled by Processing in Network Storage. IPDPS 2007: 1-6
17	EE	Nan Chen, James A. Glazier, Jesús A. Izaguirre, Mark S. Alber: A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis. Computer Physics Communications 176(11-12): 670-681 (2007)
16	EE	Chengbang Huang, Faruck Morcos, Simon P. Kanaan, Stefan Wuchty, Danny Z. Chen, Jesús A. Izaguirre: Predicting Protein-Protein Interactions from Protein Domains Using a Set Cover Approach. IEEE/ACM Trans. Comput. Biology Bioinform. 4(1): 78-87 (2007)
2005
15	EE	Justin M. Wozniak, Aaron Striegel, David Salyers, Jesús A. Izaguirre: GIPSE: Streamlining the Management of Simulation on the Grid. Annual Simulation Symposium 2005: 130-137
14	EE	Douglas Thain, Sander Klous, Justin M. Wozniak, Paul Brenner, Aaron Striegel, Jesús A. Izaguirre: Separating Abstractions from Resources in a Tactical Storage System. SC 2005: 55
13	EE	Trevor M. Cickovski, Chengbang Huang, Rajiv Chaturvedi, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre: A Framework for Three-Dimensional Simulation of Morphogenesis. IEEE/ACM Trans. Comput. Biology Bioinform. 2(4): 273-288 (2005)
12	EE	Jesús A. Izaguirre, Scott S. Hampton, Thierry Matthey: Parallel multigrid summation for the N-body problem. J. Parallel Distrib. Comput. 65(8): 949-962 (2005)
11	EE	Michael S. Crocker, Scott S. Hampton, Thierry Matthey, Jesús A. Izaguirre: MDSIMAID: Automatic parameter optimization in fast electrostatic algorithms. Journal of Computational Chemistry 26(10): 1021-1031 (2005)
2004
10	EE	Rajiv Chaturvedi, Chengbang Huang, Jesús A. Izaguirre, Stuart A. Newman, James A. Glazier, Mark S. Alber: A Hybrid Discrete-Continuum Model for 3-D Skeletogenesis of the Vertebrate Limb. ACRI 2004: 543-552
9	EE	Scott S. Hampton, Jesús A. Izaguirre: Improved Sampling for Biological Molecules Using Shadow Hybrid Monte Carlo. International Conference on Computational Science 2004: 268-275
8	EE	Thierry Matthey, Trevor M. Cickovski, Scott S. Hampton, Alice Ko, Qun Ma, Matthew Nyerges, Troy Raeder, Thomas Slabach, Jesús A. Izaguirre: ProtoMol, an object-oriented framework for prototyping novel algorithms for molecular dynamics. ACM Trans. Math. Softw. 30(3): 237-265 (2004)
7	EE	Jesús A. Izaguirre, Rajiv Chaturvedi, Chengbang Huang, Trevor M. Cickovski, J. Coffland, G. Thomas, G. Forgacs, Mark S. Alber, G. Hentschel, Stuart A. Newman, James A. Glazier: COMPUCELL, a multi-model framework for simulation of morphogenesis. Bioinformatics 20(7): 1129-1137 (2004)
2003
6	EE	Rajiv Chaturvedi, Jesús A. Izaguirre, Chengbang Huang, Trevor M. Cickovski, P. Virtue, G. Thomas, G. Forgacs, Mark S. Alber, G. Hentschel, Stuart A. Newman, James A. Glazier: Multi-model Simulations of Chicken Limb Morphogenesis. International Conference on Computational Science 2003: 39-49
5	EE	Thierry Matthey, Alice Ko, Jesús A. Izaguirre: PROTOMOL: A Molecular Dynamics Research Framework for Algorithmic Development. International Conference on Computational Science 2003: 50-59
4		Qun Ma, Jesús A. Izaguirre, Robert D. Skeel: Nonlinear Instability in Multiple Time Stepping Molecular Dynamics. SAC 2003: 167-171
3		Qun Ma, Jesús A. Izaguirre: Long Time Step Molecular Dynamics using Targeted Langevin Stabilization. SAC 2003: 178-182
2001
2		Shannon K. Kuntz, Richard C. Murphy, Michael T. Niemier, Jesús A. Izaguirre, Peter M. Kogge: Petaflop Computing for Protein Folding. PPSC 2001
1		Thierry Matthey, Jesús A. Izaguirre: ProtoMol: A Molecular Dynamics Framework with Incremental Parallelization. PPSC 2001

Coauthor Index

1	Mark S. Alber	[6] [7] [10] [13] [17]
2	Paul Brenner	[14] [18] [20] [21]
3	Rajiv Chaturvedi	[6] [7] [10] [13]
4	Danny Z. Chen	[16]
5	Nan Chen	[17]
6	Trevor M. Cickovski	[6] [7] [8] [13] [19]
7	J. Coffland	[7]
8	Michael S. Crocker	[11]
9	G. Forgacs	[6] [7]
10	James A. Glazier	[6] [7] [10] [13] [17]
11	Tilmann Glimm	[13]
12	Scott S. Hampton	[8] [9] [11] [12]
13	G. Hentschel	[6] [7]
14	H. George E. Hentschel	[13]
15	Chengbang Huang	[6] [7] [10] [13] [16]
16	Simon P. Kanaan	[16]
17	Sander Klous	[14]
18	Alice Ko	[5] [8]
19	Peter M. Kogge	[2]
20	Shannon K. Kuntz	[2]
21	Charles Lamanna	[22]
22	Qun Ma	[3] [4] [8]
23	Thierry Matthey	[1] [5] [8] [11] [12]
24	Faruck Morcos	[16] [22]
25	Richard C. Murphy	[2]
26	Stuart A. Newman	[6] [7] [10] [13]
27	Michael T. Niemier	[2]
28	Matthew Nyerges	[8]
29	J. W. Peng	[18] [20]
30	Troy Raeder	[8]
31	David Salyers	[15]
32	Marcin Sikora	[22]
33	Robert D. Skeel	[4]
34	Thomas Slabach	[8]
35	Aaron Striegel	[14] [15] [18] [20] [21]
36	Chris Sweet	[19]
37	Douglas Thain	[14] [18] [20] [21]
38	G. Thomas	[6] [7]
39	P. Virtue	[6]
40	Justin M. Wozniak	[14] [15] [18] [20] [21]
41	Stefan Wuchty	[16]