2007 |
10 | EE | Guowen Han,
Yuefan Deng,
James Glimm,
Glenn J. Martyna:
Error and timing analysis of multiple time-step integration methods for molecular dynamics.
Computer Physics Communications 176(4): 271-291 (2007) |
9 | EE | Bin Fang,
Yuefan Deng,
Glenn J. Martyna:
Performance of the 3D FFT on the 6D network torus QCDOC parallel supercomputer.
Computer Physics Communications 176(8): 531-538 (2007) |
8 | EE | Yongzhi Chen,
Xin Chen,
Yuefan Deng:
Simulating botulinum neurotoxin with constant pH molecular dynamics in Generalized Born implicit solvent.
Computer Physics Communications 177(1-2): 210-213 (2007) |
7 | EE | Bin Fang,
Glenn J. Martyna,
Yuefan Deng:
A fine grained parallel smooth particle mesh Ewald algorithm for biophysical simulation studies: Application to the 6-D torus QCDOC supercomputer.
Computer Physics Communications 177(4): 362-377 (2007) |
6 | EE | Kwang Jin Oh,
Yuefan Deng:
An efficient parallel implementation of the smooth particle mesh Ewald method for molecular dynamics simulations.
Computer Physics Communications 177(5): 426-431 (2007) |
5 | EE | Peter Rissland,
Yuefan Deng:
Electrostatic force computation for bio-molecules on supercomputers with torus networks.
Parallel Computing 33(2): 116-123 (2007) |
2001 |
4 | | Yuefan Deng,
Alex Korobka:
The performance of a supercomputer built with commodity components.
Parallel Computing 27(1-2): 91-108 (2001) |
1997 |
3 | | Chung-Chiang Chou,
Yuefan Deng:
Decomposing 40 billion integers by four tetrahedral numbers.
Math. Comput. 66(218): 893-901 (1997) |
1996 |
2 | EE | Graham Campbell,
Yuefan Deng,
James Glimm,
Yuan Wang,
Qiqing Yu,
Moisés Eisenberg,
Arthur Grollman:
Analysis and prediction of hydrogen bonding in protein-DNA complexes using parallel processors.
Journal of Computational Chemistry 17(15): 1712-1725 (1996) |
1995 |
1 | | Yuefan Deng,
R. Alan McCoy,
Robert B. Marr,
Ronald F. Peierls:
An Unconventional Method for Load Balancing.
PPSC 1995: 605-610 |