2008 |
17 | EE | David Gilbert,
Rainer Breitling,
Monika Heiner,
Robin Donaldson:
An Introduction to BioModel Engineering, Illustrated for Signal Transduction Pathways.
Workshop on Membrane Computing 2008: 13-28 |
16 | EE | Fabien Jourdan,
Rainer Breitling,
Michael P. Barrett,
David Gilbert:
MetaNetter: inference and visualization of high-resolution metabolomic networks.
Bioinformatics 24(1): 143-145 (2008) |
15 | EE | Fangxin Hong,
Rainer Breitling:
A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments.
Bioinformatics 24(3): 374-382 (2008) |
14 | EE | Rainer Breitling,
David Gilbert,
Monika Heiner,
Richard J. Orton:
A structured approach for the engineering of biochemical network models, illustrated for signalling pathways.
Briefings in Bioinformatics 9(5): 404-421 (2008) |
2007 |
13 | EE | Michael Biehl,
Rainer Breitling,
Yang Li:
Analysis of Tiling Microarray Data by Learning Vector Quantization and Relevance Learning.
IDEAL 2007: 880-889 |
12 | EE | Ali Al-Shahib,
David Gilbert,
Rainer Breitling:
Discriminating Microbial Species Using Protein Sequence Properties and Machine Learning.
IDEAL 2007: 890-897 |
11 | EE | Evert-Jan Blom,
Dinne W. J. Bosman,
Sacha A. F. T. van Hijum,
Rainer Breitling,
Lars Tijsma,
Remko Silvis,
Jos B. T. M. Roerdink,
Oscar P. Kuipers:
FIVA: Functional Information Viewer and Analyzer extracting biological knowledge from transcriptome data of prokaryotes.
Bioinformatics 23(9): 1161-1163 (2007) |
2006 |
10 | EE | Julie L. Morrison,
Rainer Breitling,
Desmond J. Higham,
David R. Gilbert:
A lock-and-key model for protein-protein interactions.
Bioinformatics 22(16): 2012-2019 (2006) |
9 | EE | Fangxin Hong,
Rainer Breitling,
Connor W. McEntee,
Ben S. Wittner,
Jennifer L. Nemhauser,
Joanne Chory:
RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis.
Bioinformatics 22(22): 2825-2827 (2006) |
2005 |
8 | EE | Rainer Breitling,
Patrick Armengaud,
Anna Amtmann:
Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds.
BMC Bioinformatics 6: 181 (2005) |
7 | EE | Julie L. Morrison,
Rainer Breitling,
Desmond J. Higham,
David R. Gilbert:
GeneRank: Using search engine technology for the analysis of microarray experiments.
BMC Bioinformatics 6: 233 (2005) |
6 | EE | Simon Rogers,
Mark Girolami,
Colin Campbell,
Rainer Breitling:
The Latent Process Decomposition of cDNA Microarray Data Sets.
IEEE/ACM Trans. Comput. Biology Bioinform. 2(2): 143-156 (2005) |
5 | EE | Ali Al-Shahib,
Rainer Breitling,
David Gilbert:
Franksum: new feature selection method for protein function prediction.
Int. J. Neural Syst. 15(4): 259-275 (2005) |
4 | EE | Rainer Breitling,
Pawel Herzyk:
Rank-based Methods as a Non-parametric Alternative of the T-statistic for the Analysis of Biological Microarray Data.
J. Bioinformatics and Computational Biology 3(5): 1171-1190 (2005) |
2004 |
3 | EE | Rainer Breitling,
Anna Amtmann,
Pawel Herzyk:
Graph-based iterative Group Analysis enhances microarray interpretation.
BMC Bioinformatics 5: 100 (2004) |
2 | EE | Rainer Breitling,
Anna Amtmann,
Pawel Herzyk:
Iterative Group Analysis (iGA): A simple tool to enhance sensitivity and facilitate interpretation of microarray experiments.
BMC Bioinformatics 5: 34 (2004) |
1 | EE | Mark Girolami,
Rainer Breitling:
Biologically valid linear factor models of gene expression.
Bioinformatics 20(17): 3021-3033 (2004) |