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Shuai Weng

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2008
19EEEurie L. Hong, Rama Balakrishnan, Qing Dong, Karen R. Christie, Julie Park, Gail Binkley, Maria C. Costanzo, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Benjamin C. Hitz, Cynthia J. Krieger, Michael S. Livstone, Stuart R. Miyasato, Robert S. Nash, Rose Oughtred, Marek S. Skrzypek, Shuai Weng, Edith D. Wong, Kathy K. Zhu, Kara Dolinski, David Botstein, J. Michael Cherry: Gene Ontology annotations at SGD: new data sources and annotation methods. Nucleic Acids Research 36(Database-Issue): 577-581 (2008)
2007
18EERobert S. Nash, Shuai Weng, Benjamin C. Hitz, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Michael S. Livstone, Rose Oughtred, Julie Park, Marek S. Skrzypek, Chandra L. Theesfeld, Gail Binkley, Qing Dong, Christopher Lane, Stuart R. Miyasato, Anand Sethuraman, Mark Schroeder, Kara Dolinski, David Botstein, J. Michael Cherry: Expanded protein information at SGD: new pages and proteome browser. Nucleic Acids Research 35(Database-Issue): 468-471 (2007)
2006
17EEJodi E. Hirschman, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Eurie L. Hong, Michael S. Livstone, Robert S. Nash, Julie Park, Rose Oughtred, Marek S. Skrzypek, Barry Starr, Chandra L. Theesfeld, Jennifer Williams, Rey Andrada, Gail Binkley, Qing Dong, Christopher Lane, Stuart R. Miyasato, Anand Sethuraman, Mark Schroeder, Mayank K. Thanawala, Shuai Weng, Kara Dolinski, David Botstein, J. Michael Cherry: Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome. Nucleic Acids Research 34(Database-Issue): 442-445 (2006)
16EENicholas A. Stover, Cynthia J. Krieger, Gail Binkley, Qing Dong, Dianna G. Fisk, Robert S. Nash, Anand Sethuraman, Shuai Weng, J. Michael Cherry: Tetrahymena Genome Database (TGD): a new genomic resource for Tetrahymena thermophila research. Nucleic Acids Research 34(Database-Issue): 500-503 (2006)
2005
15EERama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Kara Dolinski, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Robert S. Nash, Rose Oughtred, Marek S. Skrzypek, Chandra L. Theesfeld, Gail Binkley, Qing Dong, Christopher Lane, Anand Sethuraman, Shuai Weng, David Botstein, J. Michael Cherry: Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD). Nucleic Acids Research 33(Database-Issue): 374-377 (2005)
14EEThomas Yan, Danny Yoo, Tanya Z. Berardini, Lukas A. Mueller, Dan C. Weems, Shuai Weng, J. Michael Cherry, Seung Yon Rhee: PatMatch: a program for finding patterns in peptide and nucleotide sequences. Nucleic Acids Research 33(Web-Server-Issue): 262-266 (2005)
2004
13EEElizabeth I. Boyle, Shuai Weng, Jeremy Gollub, Heng Jin, David Botstein, J. Michael Cherry, Gavin Sherlock: GO: : TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes. Bioinformatics 20(18): 3710-3715 (2004)
12 Selina S. Dwight, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Kara Dolinski, Stacia R. Engel, Becket Feierbach, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Laurie Issel-Tarver, Robert S. Nash, Anand Sethuraman, Barry Starr, Chandra L. Theesfeld, Rey Andrada, Gail Binkley, Qing Dong, Christopher Lane, Mark Schroeder, Shuai Weng, David Botstein, J. Michael Cherry: Saccharomyces genome database: Underlying principles and organisation. Briefings in Bioinformatics 5(1): 9-22 (2004)
11 Karen R. Christie, Shuai Weng, Rama Balakrishnan, Maria C. Costanzo, Kara Dolinski, Selina S. Dwight, Stacia R. Engel, Becket Feierbach, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Laurie Issel-Tarver, Robert S. Nash, Anand Sethuraman, Barry Starr, Chandra L. Theesfeld, Rey Andrada, Gail Binkley, Qing Dong, Christopher Lane, Mark Schroeder, David Botstein, J. Michael Cherry: Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms. Nucleic Acids Research 32(Database-Issue): 311-314 (2004)
2003
10EEQing Dong, Rama Balakrishnan, Gail Binkley, Karen R. Christie, Maria C. Costanzo, Kara Dolinski, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Eurie L. Hong, Robert S. Nash, Laurie Issel-Tarver, Anand Sethuraman, Chandra L. Theesfeld, Shuai Weng, David Botstein, J. Michael Cherry: Gene Function, Metabolic Pathways and Comparative Genomics in Yeast. CSB 2003: 437-438
9 Shuai Weng, Qing Dong, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Kara Dolinski, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Eurie L. Hong, Laurie Issel-Tarver, Anand Sethuraman, Chandra L. Theesfeld, Rey Andrada, Gail Binkley, Christopher Lane, Mark Schroeder, David Botstein, J. Michael Cherry: Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins. Nucleic Acids Research 31(1): 216-218 (2003)
2002
8 Selina S. Dwight, Midori A. Harris, Kara Dolinski, Catherine A. Ball, Gail Binkley, Karen R. Christie, Dianna G. Fisk, Laurie Issel-Tarver, Mark Schroeder, Gavin Sherlock, Anand Sethuraman, Shuai Weng, David Botstein, J. Michael Cherry: Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO). Nucleic Acids Research 30(1): 69-72 (2002)
2001
7 Gavin Sherlock, Tina Hernandez-Boussard, Andrew Kasarskis, Gail Binkley, John C. Matese, Selina S. Dwight, Miroslava Kaloper, Shuai Weng, Heng Jin, Catherine A. Ball, Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein, J. Michael Cherry: The Stanford Microarray Database. Nucleic Acids Research 29(1): 152-155 (2001)
6 Catherine A. Ball, Heng Jin, Gavin Sherlock, Shuai Weng, John C. Matese, Rey Andrada, Gail Binkley, Kara Dolinski, Selina S. Dwight, Midori A. Harris, Laurie Issel-Tarver, Mark Schroeder, David Botstein, J. Michael Cherry: Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data. Nucleic Acids Research 29(1): 80-81 (2001)
2000
5 Catherine A. Ball, Kara Dolinski, Selina S. Dwight, Midori A. Harris, Laurie Issel-Tarver, Andrew Kasarskis, Charles R. Scafe, Gavin Sherlock, Gail Binkley, Heng Jin, Miroslava Kaloper, Sidney D. Orr, Mark Schroeder, Shuai Weng, Yan Zhu, David Botstein, J. Michael Cherry: Integrating functional genomic information into the Saccharomyces Genome Database. Nucleic Acids Research 28(1): 77-80 (2000)
1999
4 Stephen A. Chervitz, Erich T. Hester, Catherine A. Ball, Kara Dolinski, Selina S. Dwight, Midori A. Harris, Gail Juvik, Alice Malekian, Shannon Roberts, TaiYun Roe, Charles R. Scafe, Mark Schroeder, Gavin Sherlock, Shuai Weng, Yan Zhu, J. Michael Cherry, David Botstein: Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure. Nucleic Acids Research 27(1): 74-78 (1999)
3 Seung Yon Rhee, Shuai Weng, Deverie K. Bongard-Pierce, Margarita Garcia-Hernandez, Alice Malekian, David J. Flanders, J. Michael Cherry: Unified display of Arabidopsis thaliana physical maps from AtDB, the A.thaliana database. Nucleic Acids Research 27(1): 79-84 (1999)
1998
2 J. Michael Cherry, Caroline Adler, Catherine A. Ball, Stephen A. Chervitz, Selina S. Dwight, Erich T. Hester, Yankai Jia, Gail Juvik, TaiYun Roe, Mark Schroeder, Shuai Weng, David Botstein: SGD: Saccharomyces Genome Database. Nucleic Acids Research 26(1): 73-79 (1998)
1 David J. Flanders, Shuai Weng, Fabien X. Petel, J. Michael Cherry: AtDB, the Arabidopsis thaliana database, and graphical-web-display of progress by the Arabidopsis Genome Initiative. Nucleic Acids Research 26(1): 80-84 (1998)

Coauthor Index

1Caroline Adler [2]
2Rey Andrada [6] [9] [11] [12] [17]
3Rama Balakrishnan [9] [10] [11] [12] [15] [17] [18] [19]
4Catherine A. Ball [2] [4] [5] [6] [7] [8]
5Tanya Z. Berardini [14]
6Gail Binkley [5] [6] [7] [8] [9] [10] [11] [12] [15] [16] [17] [18] [19]
7Deverie K. Bongard-Pierce [3]
8David Botstein [2] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [15] [17] [18] [19]
9Elizabeth I. Boyle [13]
10Patrick O. Brown [7]
11J. Michael Cherry [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19]
12Stephen A. Chervitz [2] [4]
13Karen R. Christie [8] [9] [10] [11] [12] [15] [17] [18] [19]
14Maria C. Costanzo [9] [10] [11] [12] [15] [17] [18] [19]
15Kara Dolinski [4] [5] [6] [8] [9] [10] [11] [12] [15] [17] [18] [19]
16Qing Dong [9] [10] [11] [12] [15] [16] [17] [18] [19]
17Selina S. Dwight [2] [4] [5] [6] [7] [8] [9] [10] [11] [12] [15] [17] [18] [19]
18Michael B. Eisen [7]
19Stacia R. Engel [9] [10] [11] [12] [15] [17] [18] [19]
20Becket Feierbach [11] [12]
21Dianna G. Fisk [8] [9] [10] [11] [12] [15] [16] [17] [18] [19]
22David J. Flanders [1] [3]
23Margarita Garcia-Hernandez [3]
24Jeremy Gollub [13]
25Midori A. Harris [4] [5] [6] [8]
26Tina Hernandez-Boussard [7]
27Erich T. Hester [2] [4]
28Jodi E. Hirschman [10] [11] [12] [15] [17] [18] [19]
29Benjamin C. Hitz [18] [19]
30Eurie L. Hong [9] [10] [11] [12] [15] [17] [18] [19]
31Laurie Issel-Tarver [5] [6] [8] [9] [10] [11] [12]
32Yankai Jia [2]
33Heng Jin [5] [6] [7] [13]
34Gail Juvik [2] [4]
35Miroslava Kaloper [5] [7]
36Andrew Kasarskis [5] [7]
37Cynthia J. Krieger [16] [19]
38Christopher Lane [9] [11] [12] [15] [17] [18]
39Michael S. Livstone [17] [18] [19]
40Alice Malekian [3] [4]
41John C. Matese [6] [7]
42Stuart R. Miyasato [17] [18] [19]
43Lukas A. Mueller [14]
44Robert S. Nash [10] [11] [12] [15] [16] [17] [18] [19]
45Sidney D. Orr [5]
46Rose Oughtred [15] [17] [18] [19]
47Julie Park [17] [18] [19]
48Fabien X. Petel [1]
49Seung Yon Rhee [3] [14]
50Shannon Roberts [4]
51TaiYun Roe [2] [4]
52Charles R. Scafe [4] [5]
53Mark Schroeder [2] [4] [5] [6] [8] [9] [11] [12] [17] [18]
54Anand Sethuraman [8] [9] [10] [11] [12] [15] [16] [17] [18]
55Gavin Sherlock [4] [5] [6] [7] [8] [13]
56Marek S. Skrzypek [15] [17] [18] [19]
57Paul T. Spellman [7]
58Barry Starr [11] [12] [17]
59Nicholas A. Stover [16]
60Mayank K. Thanawala [17]
61Chandra L. Theesfeld [9] [10] [11] [12] [15] [17] [18]
62Dan C. Weems [14]
63Jennifer Williams [17]
64Edith D. Wong [19]
65Thomas Yan [14]
66Danny Yoo [14]
67Kathy K. Zhu [19]
68Yan Zhu [4] [5]

Copyright © Sun May 17 03:24:02 2009 by Michael Ley (ley@uni-trier.de)