| 2008 |
| 13 | EE | Dunarel Badescu,
Abdoulaye Baniré Diallo,
Mathieu Blanchette,
Vladimir Makarenkov:
An Evolutionary Study of the Human Papillomavirus Genomes.
RECOMB-CG 2008: 128-142 |
| 2007 |
| 12 | EE | Vladimir Makarenkov,
Pablo Zentilli,
Dmytro Kevorkov,
Andrei V. Gagarin,
Nathalie Malo,
Robert Nadon:
An efficient method for the detection and elimination of systematic error in high-throughput screening.
Bioinformatics 23(13): 1648-1657 (2007) |
| 11 | EE | Abdoulaye Baniré Diallo,
Vladimir Makarenkov,
Mathieu Blanchette:
Exact and Heuristic Algorithms for the Indel Maximum Likelihood Problem.
Journal of Computational Biology 14(4): 446-461 (2007) |
| 2006 |
| 10 | EE | Abdoulaye Baniré Diallo,
Vladimir Makarenkov,
Mathieu Blanchette:
Finding Maximum Likelihood Indel Scenarios.
Comparative Genomics 2006: 171-185 |
| 9 | EE | Vladimir Makarenkov,
Dmytro Kevorkov,
Pablo Zentilli,
Andrei V. Gagarin,
Nathalie Malo,
Robert Nadon:
HTS-Corrector: software for the statistical analysis and correction of experimental high-throughput screening data.
Bioinformatics 22(11): 1408-1409 (2006) |
| 2004 |
| 8 | EE | Vladimir Makarenkov,
François-Joseph Lapointe:
A weighted least-squares approach for inferring phylogenies from incomplete distance matrices.
Bioinformatics 20(13): 2113-2121 (2004) |
| 7 | EE | Alain Guénoche,
Bruno Leclerc,
Vladimir Makarenkov:
On the extension of a partial metric to a tree metric.
Discrete Mathematics 276(1-3): 229-248 (2004) |
| 6 | EE | Vladimir Makarenkov,
Pierre Legendre:
From a Phylogenetic Tree to a Reticulated Network.
Journal of Computational Biology 11(1): 195-212 (2004) |
| 2003 |
| 5 | EE | Alix Boc,
Vladimir Makarenkov:
New Efficient Algorithm for Detection of Horizontal Gene Transfer Events.
WABI 2003: 190-201 |
| 2001 |
| 4 | | Vladimir Makarenkov:
T-REX: reconstructing and visualizing phylogenetic trees and reticulation networks.
Bioinformatics 17(7): 664-668 (2001) |
| 2000 |
| 3 | EE | Alain Guénoche,
Bruno Leclerc,
Vladimir Makarenkov:
Generalized trees related with tree metrics.
Electronic Notes in Discrete Mathematics 5: 152-154 (2000) |
| 2 | | Vladimir Makarenkov,
Bruno Leclerc:
Comparison of Additive Trees Using Circular Orders.
Journal of Computational Biology 7(5): 731-744 (2000) |
| 1998 |
| 1 | EE | Bruno Leclerc,
Vladimir Makarenkov:
On some relations between 2-trees and tree metrics.
Discrete Mathematics 192(1-3): 223-249 (1998) |