John L. Klepeis

2009
10	EE	John L. Klepeis, Christodoulos A. Floudas: Multiple Minima Problem in Protein Folding: aplhaBB Global Optimization Approach. Encyclopedia of Optimization 2009: 2490-2497
2008
9	EE	Richard H. Larson, John K. Salmon, Ron O. Dror, Martin M. Deneroff, Cliff Young, John P. Grossman, Yibing Shan, John L. Klepeis, David E. Shaw: High-throughput pairwise point interactions in Anton, a specialized machine for molecular dynamics simulation. HPCA 2008: 331-342
8	EE	Tiankai Tu, Charles A. Rendleman, David W. Borhani, Ron O. Dror, Justin Gullingsrud, Morten Ø. Jensen, John L. Klepeis, Paul Maragakis, Patrick Miller, Kate A. Stafford, David E. Shaw: A scalable parallel framework for analyzing terascale molecular dynamics simulation trajectories. SC 2008: 56
7	EE	David E. Shaw, Martin M. Deneroff, Ron O. Dror, Jeffrey Kuskin, Richard H. Larson, John K. Salmon, Cliff Young, Brannon Batson, Kevin J. Bowers, Jack C. Chao, Michael P. Eastwood, Joseph Gagliardo, John P. Grossman, Richard C. Ho, Doug Ierardi, István Kolossváry, John L. Klepeis, Timothy Layman, Christine McLeavey, Mark A. Moraes, Rolf Mueller, Edward C. Priest, Yibing Shan, Jochen Spengler, Michael Theobald, Brian Towles, Stanley C. Wang: Anton, a special-purpose machine for molecular dynamics simulation. Commun. ACM 51(7): 91-97 (2008)
2007
6	EE	David E. Shaw, Martin M. Deneroff, Ron O. Dror, Jeffrey Kuskin, Richard H. Larson, John K. Salmon, Cliff Young, Brannon Batson, Kevin J. Bowers, Jack C. Chao, Michael P. Eastwood, Joseph Gagliardo, John P. Grossman, Richard C. Ho, Doug Ierardi, István Kolossváry, John L. Klepeis, Timothy Layman, Christine McLeavey, Mark A. Moraes, Rolf Mueller, Edward C. Priest, Yibing Shan, Jochen Spengler, Michael Theobald, Brian Towles, Stanley C. Wang: Anton, a special-purpose machine for molecular dynamics simulation. ISCA 2007: 1-12
2006
5	EE	Kevin J. Bowers, Edmond Chow, Huafeng Xu, Ron O. Dror, Michael P. Eastwood, Brent A. Gregersen, John L. Klepeis, István Kolossváry, Mark A. Moraes, Federico D. Sacerdoti, John K. Salmon, Yibing Shan, David E. Shaw: Molecular dynamics - Scalable algorithms for molecular dynamics simulations on commodity clusters. SC 2006: 84
2003
4	EE	John L. Klepeis, Christodoulos A. Floudas: Prediction of beta-sheet topology and disulfide bridges in polypeptides. Journal of Computational Chemistry 24(2): 191-208 (2003)
2002
3	EE	John L. Klepeis, Christodoulos A. Floudas: Ab initio prediction of helical segments in polypeptides. Journal of Computational Chemistry 23(2): 245-266 (2002)
1999
2	EE	John L. Klepeis, Christodoulos A. Floudas, Dimitrios Morikis, John D. Lambris: Predicting peptide structures using NMR data and deterministic global optimization. Journal of Computational Chemistry 20(13): 1354-1370 (1999)
1	EE	John L. Klepeis, Christodoulos A. Floudas: Comparative study of global minimum energy conformations of hydrated peptides. Journal of Computational Chemistry 20(6): 636-654 (1999)

Coauthor Index

1	Brannon Batson	[6] [7]
2	David W. Borhani	[8]
3	Kevin J. Bowers	[5] [6] [7]
4	Jack C. Chao	[6] [7]
5	Edmond Chow	[5]
6	Martin M. Deneroff	[6] [7] [9]
7	Ron O. Dror	[5] [6] [7] [8] [9]
8	Michael P. Eastwood	[5] [6] [7]
9	Christodoulos A. Floudas	[1] [2] [3] [4] [10]
10	Joseph Gagliardo	[6] [7]
11	Brent A. Gregersen	[5]
12	John P. Grossman	[6] [7] [9]
13	Justin Gullingsrud	[8]
14	Richard C. Ho	[6] [7]
15	Doug Ierardi	[6] [7]
16	Morten Ø. Jensen	[8]
17	István Kolossváry	[5] [6] [7]
18	Jeffrey Kuskin	[6] [7]
19	John D. Lambris	[2]
20	Richard H. Larson	[6] [7] [9]
21	Timothy Layman	[6] [7]
22	Paul Maragakis	[8]
23	Christine McLeavey	[6] [7]
24	Patrick Miller	[8]
25	Mark A. Moraes	[5] [6] [7]
26	Dimitrios Morikis	[2]
27	Rolf Mueller	[6] [7]
28	Edward C. Priest	[6] [7]
29	Charles A. Rendleman	[8]
30	Federico D. Sacerdoti	[5]
31	John K. Salmon	[5] [6] [7] [9]
32	Yibing Shan	[5] [6] [7] [9]
33	David E. Shaw	[5] [6] [7] [8] [9]
34	Jochen Spengler	[6] [7]
35	Kate A. Stafford	[8]
36	Michael Theobald	[6] [7]
37	Brian Towles	[6] [7]
38	Tiankai Tu	[8]
39	Stanley C. Wang	[6] [7]
40	Huafeng Xu	[5]
41	Cliff Young	[6] [7] [9]

Colors in the list of coauthors