2008 |
13 | EE | Joke Reumers,
Lucía Conde,
Ignacio Medina,
Sebastian Maurer-Stroh,
Joost J. J. van Durme,
Joaquín Dopazo,
Frederic Rousseau,
Joost Schymkowitz:
Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases.
Nucleic Acids Research 36(Database-Issue): 825-829 (2008) |
2007 |
12 | EE | Lucía Conde,
David Montaner,
Jordi Burguet-Castell,
Joaquín Tárraga,
Ignacio Medina,
Fátima Al-Shahrour,
Joaquín Dopazo:
ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.
Nucleic Acids Research 35(Web-Server-Issue): 81-85 (2007) |
2006 |
11 | EE | Fátima Al-Shahrour,
Pablo Minguez,
Joaquín Tárraga,
David Montaner,
Eva Alloza,
Juan M. Vaquerizas,
Lucía Conde,
Christian Blaschke,
Javier Vera,
Joaquín Dopazo:
BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.
Nucleic Acids Research 34(Web-Server-Issue): 472-476 (2006) |
10 | EE | David Montaner,
Joaquín Tárraga,
Jaime Huerta-Cepas,
Jordi Burguet-Castell,
Juan M. Vaquerizas,
Lucía Conde,
Pablo Minguez,
Javier Vera,
Sach Mukherjee,
Joan Valls,
Miguel A. G. Pujana,
Eva Alloza,
Javier Herrero,
Fátima Al-Shahrour,
Joaquín Dopazo:
Next station in microarray data analysis: GEPAS.
Nucleic Acids Research 34(Web-Server-Issue): 486-491 (2006) |
9 | EE | Lucía Conde,
Juan M. Vaquerizas,
Hernán Dopazo,
Leonardo Arbiza,
Joke Reumers,
Frederic Rousseau,
Joost Schymkowitz,
Joaquín Dopazo:
PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes.
Nucleic Acids Research 34(Web-Server-Issue): 621-625 (2006) |
2005 |
8 | EE | Fátima Al-Shahrour,
Pablo Minguez,
Juan M. Vaquerizas,
Lucía Conde,
Joaquín Dopazo:
BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments.
Nucleic Acids Research 33(Web-Server-Issue): 460-464 (2005) |
7 | EE | Lucía Conde,
Juan M. Vaquerizas,
Carles Ferrer-Costa,
Xavier de la Cruz,
Modesto Orozco,
Joaquín Dopazo:
PupasView: a visual tool for selecting suitable SNPs, with putative pathological effect in genes, for genotyping purposes.
Nucleic Acids Research 33(Web-Server-Issue): 501-505 (2005) |
6 | EE | Juan M. Vaquerizas,
Lucía Conde,
Patricio Yankilevich,
Amaya Cabezón,
Pablo Minguez,
Ramón Díaz-Uriarte,
Fátima Al-Shahrour,
Javier Herrero,
Joaquín Dopazo:
GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data.
Nucleic Acids Research 33(Web-Server-Issue): 616-620 (2005) |
2004 |
5 | | Javier Herrero,
Juan M. Vaquerizas,
Fátima Al-Shahrour,
Lucía Conde,
Álvaro Mateos,
Javier Santoyo,
Ramón Díaz-Uriarte,
Joaquín Dopazo:
New Challenges in Gene Expression Data Analysis and the Extended GEPAS.
Spanish Bioinformatics Conference 2004: 1-5 |
4 | | Lucía Conde,
Juan M. Vaquerizas,
Javier Santoyo,
Fátima Al-Shahrour,
Joaquín Dopazo:
Finding SNPs with Putative Phenotypic Effect at Transcriptional Level.
Spanish Bioinformatics Conference 2004: 157-160 |
3 | | Lucía Conde,
Juan M. Vaquerizas,
Javier Santoyo,
Fátima Al-Shahrour,
Sergio Ruiz-Llorente,
Mercedes Robledo,
Joaquín Dopazo:
PupaSNP Finder: a web tool for finding SNPs with putative effect at transcriptional level.
Nucleic Acids Research 32(Web-Server-Issue): 242-248 (2004) |
2 | | Javier Herrero,
Juan M. Vaquerizas,
Fátima Al-Shahrour,
Lucía Conde,
Álvaro Mateos,
Javier Santoyo,
Ramón Díaz-Uriarte,
Joaquín Dopazo:
New challenges in gene expression data analysis and the extended GEPAS.
Nucleic Acids Research 32(Web-Server-Issue): 485-491 (2004) |
2003 |
1 | EE | Lucía Conde,
Álvaro Mateos,
Javier Herrero,
Joaquín Dopazo:
Improved Class Prediction in DNA Microarray Gene Expression Data by Unsupervised Reduction of the Dimensionality followed by Supervised Learning with a Perceptron.
VLSI Signal Processing 35(3): 245-253 (2003) |