2005 |
8 | EE | David van der Spoel,
Erik Lindahl,
Berk Hess,
Gerrit Groenhof,
Alan E. Mark,
Herman J. C. Berendsen:
GROMACS: Fast, flexible, and free.
Journal of Computational Chemistry 26(16): 1701-1718 (2005) |
1999 |
7 | EE | K. Anton Feenstra,
Berk Hess,
Herman J. C. Berendsen:
Improving efficiency of large time-scale molecular dynamics simulations of hydrogen-rich systems.
Journal of Computational Chemistry 20(8): 786-798 (1999) |
6 | EE | Marc F. Lensink,
Janez Mavri,
Herman J. C. Berendsen:
Simulation of slow reaction with quantum character: Neutral hydrolysis of carboxylic ester.
Journal of Computational Chemistry 20(8): 886-895 (1999) |
1997 |
5 | EE | Berk Hess,
Henk Bekker,
Herman J. C. Berendsen,
Johannes G. E. M. Fraaije:
LINCS: A linear constraint solver for molecular simulations.
Journal of Computational Chemistry 18(12): 1463-1472 (1997) |
4 | EE | Daan M. F. van Aalten,
Bert L. de Groot,
John B. C. Findlay,
Herman J. C. Berendsen,
Andrea Amadei:
A comparison of techniques for calculating protein essential dynamics.
Journal of Computational Chemistry 18(2): 169-181 (1997) |
1996 |
3 | | Rudi van Drunen,
Cees van Teylingen,
Marcel Kroontje,
Herman J. C. Berendsen:
The Amfisbaena: A Parallel Sup computer System Based on i860 as a Generic Platform for Molecular Dynamics Simulation.
PDPTA 1996: 637-644 |
2 | EE | Marc F. Lensink,
Janez Mavri,
Herman J. C. Berendsen:
Simultaneous integration of mixed quantum-classical systems by density matrix evolution equations using interaction representation and adaptive time step integrator.
Journal of Computational Chemistry 17(11): 1287-1295 (1996) |
1992 |
1 | | René C. van Schaik,
Wilfred F. van Gunsteren,
Herman J. C. Berendsen:
Conformational search by potential energy annealing: Algorithm and application to cyclosporin A.
Journal of Computer-Aided Molecular Design 6(2): 97-112 (1992) |