Ruben Abagyan

2009
19	EE	Kimberly A. Reynolds, Vsevolod Katritch, Ruben Abagyan: Identifying conformational changes of the beta2 adrenoceptor that enable accurate prediction of ligand/receptor interactions and screening for GPCR modulators. Journal of Computer-Aided Molecular Design 23(5): 273-288 (2009)
2008
18	EE	George Nicola, Colin A. Smith, Ruben Abagyan: New Method for the Assessment of All Drug-Like Pockets Across a Structural Genome. Journal of Computational Biology 15(3): 231-240 (2008)
2007
17	EE	José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón: ADP_EM: fast exhaustive multi-resolution docking for high-throughput coverage. Bioinformatics 23(4): 427-433 (2007)
16	EE	José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón: DFprot: a webtool for predicting local chain deformability. Bioinformatics 23(7): 901-902 (2007)
2006
15	EE	Levon Budagyan, Ruben Abagyan: Weighted quality estimates in machine learning. Bioinformatics 22(21): 2597-2603 (2006)
2005
14	EE	Andrew J. Bordner, Ruben Abagyan: REVCOM: a robust Bayesian method for evolutionary rate estimation. Bioinformatics 21(10): 2315-2321 (2005)
2004
13	EE	Brian Marsden, Ruben Abagyan: SAD - a normalized structural alignment database: improving sequence-structure alignments. Bioinformatics 20(15): 2333-2344 (2004)
2003
12	EE	Vsevolod Katritch, Maxim Totrov, Ruben Abagyan: ICFF: A new method to incorporate implicit flexibility into an internal coordinate force field. Journal of Computational Chemistry 24(2): 254-265 (2003)
11		Badry D. Bursulaya, Maxim Totrov, Ruben Abagyan, Charles L. Brooks III: Comparative study of several algorithms for flexible ligand docking. Journal of Computer-Aided Molecular Design 17(11): 755-763 (2003)
2002
10	EE	Juan Fernandez-Recio, Maxim Totrov, Ruben Abagyan: Screened Charge Electrostatic Model in Protein-Protein Docking Simulations. Pacific Symposium on Biocomputing 2002: 552-565
9	EE	Ruben Abagyan: Computational structural proteomics and virtual ligand screening. RECOMB 2002: 1
8	EE	Yingyao Zhou, Ruben Abagyan: Match-Only Integral Distribution (MOID) Algorithm for high-density oligonucleotide array analysis. BMC Bioinformatics 3: 3 (2002)
2000
7	EE	Timothy Cardozo, Serge Batalov, Ruben Abagyan: Estimating Local Backbone Structural Deviation in Homology Models. Computers & Chemistry 24(1): 13-31 (2000)
1999
6	EE	Maxim Totrov, Ruben Abagyan: Derivation of sensitive discrimination potential for virtual ligand screening. RECOMB 1999: 312-320
1998
5	EE	Ruben Abagyan: Challenges of biomolecular structure prediction (abstract). RECOMB 1998: 1
1997
4		Ruben Abagyan, Serge Batalov, Timothy Cardozo, Maxim Totrov: From fold recognition to flexible docking. German Conference on Bioinformatics 1997: 9-10
1994
3	EE	Patrick Argos, Ruben Abagyan: The Protein Folding Problem: Finding a Few Minimums in a Near Infinite Space. Computers & Chemistry 18(3): 225-231 (1994)
2		Maxim Totrov, Ruben Abagyan: Efficient Parallelization of the Energy, Surface, and Dericative Calculations for Internal Coordinate Mechanics. Journal of Computational Chemistry 15(10): 1105-1112 (1994)
1		Ruben Abagyan, Maxim Totrov, Dmitry Kuznetsov: ICM - A New Method for Protein Modeling and Design: Applications to Docking and Strucutre Prediction from the Distorted Native Conformation. Journal of Computational Chemistry 15(5): 488-506 (1994)

Coauthor Index

1	Patrick Argos	[3]
2	Serge Batalov	[4] [7]
3	Andrew J. Bordner	[14]
4	Charles L. Brooks III	[11]
5	Levon Budagyan	[15]
6	Badry D. Bursulaya	[11]
7	Timothy Cardozo	[4] [7]
8	Pablo Chacón	[16] [17]
9	Juan Fernandez-Recio	[10]
10	José Ignacio Garzón	[16] [17]
11	Vsevolod Katritch	[12] [19]
12	Julio A. Kovacs	[16] [17]
13	Dmitry Kuznetsov	[1]
14	Brian Marsden	[13]
15	George Nicola	[18]
16	Kimberly A. Reynolds	[19]
17	Colin A. Smith	[18]
18	Maxim Totrov	[1] [2] [4] [6] [10] [11] [12]
19	Yingyao Zhou	[8]

Colors in the list of coauthors