Regulatory Genomics / RECOMB 2004: San Diego, CA, USA

Eleazar Eskin, Christopher T. Workman (Eds.): Regulatory Genomics, RECOMB 2004 International Workshop, RRG 2004, San Diego, CA, USA, March 26-27, 2004, Revised Selected Papers. Lecture Notes in Computer Science 3318 Springer 2005, ISBN 3-540-24456-5 BibTeX

Manuel Middendorf, Anshul Kundaje, Chris Wiggins, Yoav Freund, Christina S. Leslie:
Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response. 1-13
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Thomas Manke, Christoph Dieterich, Martin Vingron:
Detecting Functional Modules of Transcription Factor Binding Sites in the Human Genome. 14-21
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William Krivan:
Fishing for Proteins in the Pacific Northwest. 22-29
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Rahul Siddharthan, Erik van Nimwegen, Eric D. Siggia:
PhyloGibbs: A Gibbs Sampler Incorporating Phylogenetic Information. 30-41
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Alexander E. Kel, Yuri Tikunov, Nico Voss, Jürgen Borlak, Edgar Wingender:
Application of Kernel Method to Reveal Subtypes of TF Binding Motifs. 42-51
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Keith Noto, Mark Craven:
Learning Regulatory Network Models that Represent Regulator States and Roles. 52-64
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Chaya Ben-Zaken Zilberstein, Eleazar Eskin, Zohar Yakhini:
Using Expression Data to Discover RNA and DNA Regulatory Sequence Motifs. 65-78
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Natalia Polouliakh, Michiko Konno, Paul Horton, Kenta Nakai:
Parameter Landscape Analysis for Common Motif Discovery Programs. 79-87
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Vladimir Filkov, Nameeta Shah:
Inferring Cis-region Hierarchies from Patterns in Time-Course Gene Expression Data. 88-97
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Irit Gat-Viks, Amos Tanay, Ron Shamir:
Modeling and Analysis of Heterogeneous Regulation in Biological Networks. 98-113
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