2009 |
19 | EE | Yoshimasa Tsuruoka,
Jun-ichi Tsujii,
Sophia Ananiadou:
Fast Full Parsing by Linear-Chain Conditional Random Fields.
EACL 2009: 790-798 |
2008 |
18 | EE | Naoaki Okazaki,
Yoshimasa Tsuruoka,
Sophia Ananiadou,
Jun-ichi Tsujii:
A Discriminative Candidate Generator for String Transformations.
EMNLP 2008: 447-456 |
17 | EE | Yoshinobu Kano,
Ngan Nguyen,
Rune Sætre,
Kazuhiro Yoshida,
Yusuke Miyao,
Yoshimasa Tsuruoka,
Yuichiro Matsubayashi,
Sophia Ananiadou,
Jun-ichi Tsujii:
Filling the Gaps Between Tools and Users: A Tool Comparator, Using Protein-Protein Interactions as an Example.
Pacific Symposium on Biocomputing 2008: 616-627 |
16 | EE | Chikashi Nobata,
Philip Cotter,
Naoaki Okazaki,
Brian Rea,
Yutaka Sasaki,
Yoshimasa Tsuruoka,
Jun-ichi Tsujii,
Sophia Ananiadou:
Kleio: a knowledge-enriched information retrieval system for biology.
SIGIR 2008: 787-788 |
15 | EE | Yoshimasa Tsuruoka,
Jun-ichi Tsujii,
Sophia Ananiadou:
FACTA: a text search engine for finding associated biomedical concepts.
Bioinformatics 24(21): 2559-2560 (2008) |
2007 |
14 | EE | Kazuhiro Yoshida,
Yoshimasa Tsuruoka,
Yusuke Miyao,
Jun-ichi Tsujii:
Ambiguous Part-of-Speech Tagging for Improving Accuracy and Domain Portability of Syntactic Parsers.
IJCAI 2007: 1783-1788 |
13 | EE | Yoshimasa Tsuruoka,
John McNaught,
Jun-ichi Tsujii,
Sophia Ananiadou:
Learning string similarity measures for gene/protein name dictionary look-up using logistic regression.
Bioinformatics 23(20): 2768-2774 (2007) |
2006 |
12 | EE | Tomoko Ohta,
Yusuke Miyao,
Takashi Ninomiya,
Yoshimasa Tsuruoka,
Akane Yakushiji,
Katsuya Masuda,
Jumpei Takeuchi,
Kazuhiro Yoshida,
Tadayoshi Hara,
Jin-Dong Kim,
Yuka Tateisi,
Jun-ichi Tsujii:
An Intelligent Search Engine and GUI-based Efficient MEDLINE Search Tool Based on Deep Syntactic Parsing.
ACL 2006 |
11 | EE | Daisuke Okanohara,
Yusuke Miyao,
Yoshimasa Tsuruoka,
Jun-ichi Tsujii:
Improving the Scalability of Semi-Markov Conditional Random Fields for Named Entity Recognition.
ACL 2006 |
10 | EE | Yusuke Miyao,
Tomoko Ohta,
Katsuya Masuda,
Yoshimasa Tsuruoka,
Kazuhiro Yoshida,
Takashi Ninomiya,
Jun-ichi Tsujii:
Semantic Retrieval for the Accurate Identification of Relational Concepts in Massive Textbases.
ACL 2006 |
9 | EE | Hong-Woo Chun,
Yoshimasa Tsuruoka,
Jin-Dong Kim,
Rie Shiba,
Naoki Nagata,
Teruyoshi Hishiki,
Jun-ichi Tsujii:
Extraction of Gene-Disease Relations from Medline Using Domain Dictionaries and Machine Learning.
Pacific Symposium on Biocomputing 2006: 4-15 |
8 | EE | Rune Sætre,
Harald Søvik,
Tore Amble,
Yoshimasa Tsuruoka:
GeneTUC, GENIA and Google: Natural Language Understanding in Molecular Biology Literature.
T. Comp. Sys. Biology: 68-82 (2006) |
2005 |
7 | EE | Yoshimasa Tsuruoka,
Jun-ichi Tsujii:
Bidirectional Inference with the Easiest-First Strategy for Tagging Sequence Data.
HLT/EMNLP 2005 |
6 | EE | Yoshimasa Tsuruoka,
Yuka Tateishi,
Jin-Dong Kim,
Tomoko Ohta,
John McNaught,
Sophia Ananiadou,
Jun-ichi Tsujii:
Developing a Robust Part-of-Speech Tagger for Biomedical Text.
Panhellenic Conference on Informatics 2005: 382-392 |
2004 |
5 | EE | Yoshimasa Tsuruoka,
Jun-ichi Tsujii:
Iterative CKY Parsing for Probabilistic Context-Free Grammars.
IJCNLP 2004: 52-60 |
4 | EE | Yoshimasa Tsuruoka,
Jun-ichi Tsujii:
Improving the performance of dictionary-based approaches in protein name recognition.
Journal of Biomedical Informatics 37(6): 461-470 (2004) |
2003 |
3 | EE | Yoshimasa Tsuruoka,
Jun-ichi Tsujii:
Probabilistic term variant generator for biomedical terms.
SIGIR 2003: 167-173 |
2 | EE | Teruyoshi Hishiki,
Osamu Ogasawara,
Yoshimasa Tsuruoka,
Kousaku Okubo:
Indexing anatomical concepts to OMIM Clinical Synopsis using UMLS Metathesaurus.
In Silico Biology 4: (2003) |
2001 |
1 | EE | Yoshimasa Tsuruoka,
Takashi Chikayama:
Estimating Reliability of Contextual Evidences in Decision-List Classifiers under Bayesian Learning.
NLPRS 2001: 701-707 |