2009 |
15 | EE | Guangming Tan,
Ninghui Sun,
Guang R. Gao:
Improving Performance of Dynamic Programming via Parallelism and Locality on Multicore Architectures.
IEEE Trans. Parallel Distrib. Syst. 20(2): 261-274 (2009) |
2008 |
14 | EE | Guangming Tan,
Vugranam C. Sreedhar,
Guang R. Gao:
Just-In-Time Locality and Percolation for Optimizing Irregular Applications on a Manycore Architecture.
LCPC 2008: 331-342 |
13 | EE | Guangming Tan,
Dongrui Fan,
Junchao Zhang,
Andrew Russo,
Guang R. Gao:
Experience on optimizing irregular computation for memory hierarchy in manycore architecture.
PPOPP 2008: 279-280 |
2007 |
12 | EE | Peiheng Zhang,
Guangming Tan,
Guang R. Gao:
Implementation of the Smith-Waterman algorithm on a reconfigurable supercomputing platform.
HPRCTA 2007: 39-48 |
11 | EE | Guangming Tan,
Ninghui Sun,
Guang R. Gao:
A parallel dynamic programming algorithm on a multi-core architecture.
SPAA 2007: 135-144 |
10 | EE | Guangming Tan,
Shengzhong Feng,
Ninghui Sun:
Cache oblivious algorithms for nonserial polyadic programming.
The Journal of Supercomputing 39(2): 227-249 (2007) |
2006 |
9 | EE | Guangming Tan,
Liu Peng,
Shengzhong Feng,
Ninghui Sun:
Load Balancing and Parallel Multiple Sequence Alignment with Tree Accumulation.
Euro-Par 2006: 1138-1147 |
8 | EE | Guangming Tan,
Lin Xu,
Shengzhong Feng,
Ninghui Sun:
An experimental study of optimizing bioinformatics applications.
IPDPS 2006 |
7 | EE | Guangming Tan,
Ninghui Sun,
Dongbo Bu:
Improving locality of nonserial polyadic dynamic programming.
IPDPS 2006 |
6 | EE | Guangming Tan,
Shengzhong Feng,
Ninghui Sun:
Biology - Locality and parallelism optimization for dynamic programming algorithm in bioinformatics.
SC 2006: 78 |
5 | EE | Guangming Tan,
Lin Xu,
Dongbo Bu,
Shengzhong Feng,
Ninghui Sun:
Improvement of Performance of MegaBlast Algorithm for DNA Sequence Alignment.
J. Comput. Sci. Technol. 21(6): 973-978 (2006) |
2005 |
4 | EE | Guangming Tan,
Lin Xu,
Yishan Jiao,
Shengzhong Feng,
Dongbo Bu,
Ninghui Sun:
An Optimized Algorithm of High Spatial-temporal Efficiency for MegaBlast.
ICPADS (2) 2005: 704-708 |
3 | EE | Guangming Tan,
Shengzhong Feng,
Ninghui Sun:
Load Balancing Algorithm in Cluster-based RNA secondary structure Prediction.
ISPDC 2005: 91-96 |
2 | EE | Guangming Tan,
Xinchun Liu,
Ninghui Sun:
An Efficient Dynamic Programming Algorithm and Implementation for RNA Secondary Structure Prediction.
International Conference on Computational Science (2) 2005: 869-876 |
1 | EE | Guangming Tan,
Shengzhong Feng,
Ninghui Sun:
Exploiting Parallelization for RNA Secondary Structure Prediction in Cluster.
International Conference on Computational Science (3) 2005: 979-982 |