2008 |
46 | EE | Ion Petre,
Grzegorz Rozenberg:
Summary of the Workshop on Natural Computing and Graph Transformations.
ICGT 2008: 470-472 |
45 | EE | Tero Harju,
Ion Petre,
Vladimir Rogojin,
Grzegorz Rozenberg:
Patterns of simple gene assembly in ciliates.
Discrete Applied Mathematics 156(14): 2581-2597 (2008) |
44 | EE | Tero Harju,
Chang Li,
Ion Petre:
Graph theoretic approach to parallel gene assembly.
Discrete Applied Mathematics 156(18): 3416-3429 (2008) |
43 | EE | Tseren-Onolt Ishdorj,
Remco Loos,
Ion Petre:
Computational Efficiency of Intermolecular Gene Assembly.
Fundam. Inform. 84(3-4): 363-373 (2008) |
42 | EE | Ion Petre,
Vladimir Rogojin:
Decision problem for shuffled genes.
Inf. Comput. 206(11): 1346-1352 (2008) |
41 | EE | Tseren-Onolt Ishdorj,
Ion Petre:
Gene Assembly Models and Boolean Circuits.
Int. J. Found. Comput. Sci. 19(5): 1133-1145 (2008) |
40 | EE | Artiom Alhazov,
Ion Petre,
Vladimir Rogojin:
Solutions to computational problems through gene assembly.
Natural Computing 7(3): 385-401 (2008) |
39 | EE | Tero Harju,
Chang Li,
Ion Petre:
Parallel complexity of signed graphs for gene assembly in ciliates.
Soft Comput. 12(8): 731-737 (2008) |
38 | EE | Adrian Atanasiu,
Radu Atanasiu,
Ion Petre:
Parikh matrices and amiable words.
Theor. Comput. Sci. 390(1): 102-109 (2008) |
37 | EE | Miika Langille,
Ion Petre:
Sequential vs. parallel complexity in simple gene assembly.
Theor. Comput. Sci. 395(1): 24-30 (2008) |
2007 |
36 | EE | Artiom Alhazov,
Ion Petre,
Vladimir Rogojin:
Solutions to Computational Problems Through Gene Assembly.
DNA 2007: 36-45 |
35 | EE | Robert Brijder,
Miika Langille,
Ion Petre:
A String-Based Model for Simple Gene Assembly.
FCT 2007: 161-172 |
34 | EE | Tseren-Onolt Ishdorj,
Ion Petre:
Computing Through Gene Assembly.
UC 2007: 91-105 |
33 | EE | Tseren-Onolt Ishdorj,
Ion Petre,
Vladimir Rogojin:
Computational Power of intramolecular gene Assembly.
Int. J. Found. Comput. Sci. 18(5): 1123-1136 (2007) |
32 | EE | Erzsébet Csuhaj-Varjú,
Ion Petre,
György Vaszil:
Self-assembly of strings and languages.
Theor. Comput. Sci. 374(1-3): 74-81 (2007) |
2006 |
31 | EE | Tero Harju,
Chang Li,
Ion Petre,
Grzegorz Rozenberg:
Complexity Measures for Gene Assembly.
KDECB 2006: 42-60 |
30 | EE | Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Modelling Simple Operations for Gene Assembly.
Nanotechnology: Science and Computation 2006: 361-373 |
29 | EE | Miika Langille,
Ion Petre:
Simple Gene Assembly Is Deterministic.
Fundam. Inform. 73(1-2): 179-190 (2006) |
28 | EE | Lucian Ilie,
Solomon Marcus,
Ion Petre:
Periodic and Sturmian languages.
Inf. Process. Lett. 98(6): 242-246 (2006) |
27 | EE | Tero Harju,
Chang Li,
Ion Petre,
Grzegorz Rozenberg:
Parallelism in Gene Assembly.
Natural Computing 5(2): 203-223 (2006) |
26 | EE | Ion Petre:
Invariants of Gene-Assembly in Stichotrichous Ciliates (Invarianten der Gen-Assemblierung in Ciliaten der Unterklasse Stichotrichia).
it - Information Technology 48(3): 161-167 (2006) |
2005 |
25 | EE | Tero Harju,
Ion Petre,
Vladimir Rogojin,
Grzegorz Rozenberg:
Simple Operations for Gene Assembly.
DNA 2005: 96-111 |
24 | EE | Juhani Karhumäki,
Michel Latteux,
Ion Petre:
Commutation with codes.
Theor. Comput. Sci. 340(1): 322-333 (2005) |
23 | EE | Juhani Karhumäki,
Michel Latteux,
Ion Petre:
Commutation with Ternary Sets of Words.
Theory Comput. Syst. 38(2): 161-169 (2005) |
2004 |
22 | EE | Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Formal Properties of Gene Assembly: Equivalence Problem for Overlap Graphs.
Aspects of Molecular Computing 2004: 202-212 |
21 | EE | Tero Harju,
Chang Li,
Ion Petre,
Grzegorz Rozenberg:
Parallelism in Gene Assembly.
DNA 2004: 138-148 |
20 | EE | Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Tutorial on DNA Computing and Graph Transformation.
ICGT 2004: 434-436 |
19 | EE | Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Two Models for Gene Assembly in Ciliates.
Theory Is Forever 2004: 89-101 |
18 | | Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Gene Assembly in Celiates. Part I. Molecular Operations (Column: Natural Computing).
Bulletin of the EATCS 82: 227-241 (2004) |
2003 |
17 | | Ion Petre:
On the Difference Problem for Semilinear Power Series.
Grammars and Automata for String Processing 2003: 317-326 |
16 | EE | Juhani Karhumäki,
Michel Latteux,
Ion Petre:
The Commutation with Codes and Ternary Sets of Words.
STACS 2003: 74-84 |
15 | | Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Gene Assembly in Ciliates Part I. Molecular Operations.
Bulletin of the EATCS 81: 236-249 (2003) |
14 | | Andrzej Ehrenfeucht,
Tero Harju,
Ion Petre,
David M. Prescott,
Grzegorz Rozenberg:
Formal systems for gene assembly in ciliates.
Theor. Comput. Sci. 292(1): 199-219 (2003) |
2002 |
13 | EE | Juhani Karhumäki,
Ion Petre:
The Branching Point Approach to Conway's Problem.
Formal and Natural Computing 2002: 69-76 |
12 | EE | Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Tutorial on DNA Computing and Graph Transformation - Computational Nature of Gene Assembly in Ciliates.
ICGT 2002: 430-434 |
11 | | Andrzej Ehrenfeucht,
Ion Petre,
David M. Prescott,
Grzegorz Rozenberg:
String and Graph Reduction Systems for Gene Assembly in Ciliates.
Mathematical Structures in Computer Science 12(2): 113-134 (2002) |
10 | | Juhani Karhumäki,
Ion Petre:
Conway's problem for three-word sets.
Theor. Comput. Sci. 289(1): 705-725 (2002) |
9 | EE | Andrzej Ehrenfeucht,
Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Characterizing the Micronuclear Gene Patterns in Ciliates.
Theory Comput. Syst. 35(5): 501-519 (2002) |
2001 |
8 | EE | Andrzej Ehrenfeucht,
Tero Harju,
Ion Petre,
Grzegorz Rozenberg:
Patterns of Micronuclear Genes in ciliates.
DNA 2001: 279-289 |
7 | | Andrzej Ehrenfeucht,
Ion Petre,
David M. Prescott,
Grzegorz Rozenberg:
Circularity and Other Invariants of Gene Assembly in Ciliates.
Words, Semigroups, and Transductions 2001: 81-97 |
6 | | Juhani Karhumäki,
Ion Petre:
Conway's Problem and the Communication of Languages.
Bulletin of the EATCS 74: 171-189 (2001) |
2000 |
5 | EE | Juhani Karhumäki,
Ion Petre:
On the Centralizer of a Finite Set.
ICALP 2000: 536-546 |
1999 |
4 | | Ion Petre:
On semilinearity in formal power series.
Developments in Language Theory 1999: 220-231 |
3 | | Ion Petre:
A Normal form for P-Systems.
Bulletin of the EATCS 67: 165-172 (1999) |
2 | EE | Ion Petre,
Luigia Petre:
Mobile Ambients and P-Systems.
J. UCS 5(9): 588-598 (1999) |
1 | | Ion Petre:
Parikh's Theorem Does Not Hold for Multiplicities.
Journal of Automata, Languages and Combinatorics 4(1): 17-30 (1999) |