2009 |
15 | EE | Johannes W. Kruisselbrink,
Michael T. M. Emmerich,
Thomas Bäck,
Andreas Bender,
Adriaan P. IJzerman,
Eelke van der Horst:
Combining Aggregation with Pareto Optimization: A Case Study in Evolutionary Molecular Design.
EMO 2009: 453-467 |
2008 |
14 | EE | Johannes W. Kruisselbrink,
Thomas Bäck,
Adriaan P. IJzerman,
Eelke van der Horst:
Evolutionary algorithms for automated drug design towards target molecule properties.
GECCO 2008: 1555-1562 |
13 | EE | Kai Ye,
K. Anton Feenstra,
Jaap Heringa,
Adriaan P. IJzerman,
Elena Marchiori:
Multi-RELIEF: a method to recognize specificity determining residues from multiple sequence alignments using a Machine-Learning approach for feature weighting.
Bioinformatics 24(1): 18-25 (2008) |
12 | EE | Kai Ye,
Gert Vriend,
Adriaan P. IJzerman:
Tracing evolutionary pressure.
Bioinformatics 24(7): 908-915 (2008) |
2007 |
11 | EE | Kai Ye,
Walter A. Kosters,
Adriaan P. IJzerman:
An efficient, versatile and scalable pattern growth approach to mine frequent patterns in unaligned protein sequences.
Bioinformatics 23(6): 687-693 (2007) |
2006 |
10 | EE | Eric-Wubbo Lameijer,
Joost N. Kok,
Thomas Bäck,
Adriaan P. IJzerman:
The Molecule Evoluator. An Interactive Evolutionary Algorithm for the Design of Drug-Like Molecules.
Journal of Chemical Information and Modeling 46(2): 545-552 (2006) |
9 | EE | Eric-Wubbo Lameijer,
Joost N. Kok,
Thomas Bäck,
Adriaan P. IJzerman:
Mining a Chemical Database for Fragment Co-occurrence: Discovery of "Chemical Clichés".
Journal of Chemical Information and Modeling 46(2): 553-562 (2006) |
8 | EE | Jeroen Kazius,
Siegfried Nijssen,
Joost N. Kok,
Thomas Bäck,
Adriaan P. IJzerman:
Substructure Mining Using Elaborate Chemical Representation.
Journal of Chemical Information and Modeling 46(2): 597-605 (2006) |
7 | EE | Elena V. Samsonova,
Joost N. Kok,
Adriaan P. IJzerman:
TreeSOM: Cluster analysis in the self-organizing map.
Neural Networks 19(6-7): 935-949 (2006) |
2005 |
6 | EE | Eric-Wubbo Lameijer,
Adriaan P. IJzerman,
Joost N. Kok:
Using data mining to improve mutation in a tool for molecular evolution.
Congress on Evolutionary Computation 2005: 314-321 |
5 | EE | Eric-Wubbo Lameijer,
Adriaan P. IJzerman,
Joost N. Kok:
The molecule evoluator: an interactive evolutionary algorithm for designing drug molecules.
GECCO 2005: 1969-1976 |
4 | EE | Elena V. Samsonova,
Thomas Bäck,
Joost N. Kok,
Adriaan P. IJzerman:
Reliable Hierarchical Clustering with the Self-organizing Map.
IDA 2005: 385-396 |
3 | EE | Eric-Wubbo Lameijer,
Thomas Bäck,
Joost N. Kok,
Adriaan P. IJzerman:
Evolutionary Algorithms in Drug Design.
Natural Computing 4(3): 177-243 (2005) |
2003 |
2 | EE | Elena V. Samsonova,
Thomas Bäck,
Margot W. Beukers,
Adriaan P. IJzerman,
Joost N. Kok:
Combining and Comparing Cluster Methods in a Receptor Database.
IDA 2003: 341-351 |
1995 |
1 | | Eleonora M. van der Wenden,
Sarah L. Price,
Robert P. Apaya,
Adriaan P. IJzerman,
Willem Soudijn:
Relative binding orientations of adenosine A1 receptor ligands - A test case for Distributed Multipole Analysis in medicinal chemistry.
Journal of Computer-Aided Molecular Design 9(1): 44-54 (1995) |