| |
| 2008 | ||
|---|---|---|
| 11 | EE | Yuri R. Bendaña, Ian Holmes: Colorstock, SScolor, Ratón: RNA alignment visualization tools. Bioinformatics 24(4): 579-580 (2008) |
| 2007 | ||
| 10 | EE | Robert K. Bradley, Ian Holmes: Transducers: an emerging probabilistic framework for modeling indels on trees. Bioinformatics 23(23): 3258-3262 (2007) |
| 9 | EE | Ian Holmes: Phylocomposer and phylodirector: analysis and visualization of transducer indel models. Bioinformatics 23(23): 3263-3264 (2007) |
| 2005 | ||
| 8 | EE | Ian Holmes: Accelerated probabilistic inference of RNA structure evolution. BMC Bioinformatics 6: 73 (2005) |
| 7 | EE | Ian Holmes: Using evolutionary Expectation Maximization to estimate indel rates. Bioinformatics 21(10): 2294-2300 (2005) |
| 2004 | ||
| 6 | EE | Ian Holmes: A probabilistic model for the evolution of RNA structure. BMC Bioinformatics 5: 166 (2004) |
| 2002 | ||
| 5 | EE | Ian Holmes, Gerald M. Rubin: Pairwise RNA Structure Comparison with Stochastic Context-Free Grammars. Pacific Symposium on Biocomputing 2002: 163-174 |
| 2001 | ||
| 4 | Ian Holmes, William J. Bruno: Evolutionary HMMs: a Bayesian approach to multiple alignment. Bioinformatics 17(9): 803-820 (2001) | |
| 2000 | ||
| 3 | Ian Holmes, William J. Bruno: Finding Regulatory Elements Using Joint Likelihoods for Sequence and Expression Profile Data. ISMB 2000: 202-210 | |
| 1998 | ||
| 2 | EE | Ian Holmes, Richard Durbin: Dynamic programming alignment accuracy. RECOMB 1998: 102-108 |
| 1 | Ian Holmes, Richard Durbin: Dynamic Programming Alignment Accuracy. Journal of Computational Biology 5(3): 493-504 (1998) | |
| 1 | Yuri R. Bendaña | [11] |
| 2 | Robert K. Bradley | [10] |
| 3 | William J. Bruno | [3] [4] |
| 4 | Richard Durbin | [1] [2] |
| 5 | Gerald M. Rubin | [5] |