2008 |
17 | | Chen Wang,
Jianhua Xuan,
Li Chen,
Eric P. Hoffman,
Robert Clarke:
Reliability Analysis of Transcriptional Regulatory Networks.
BCBGC 2008: 42-48 |
16 | | Jianghui Xiong,
Chen Wang,
Bai Zhang,
Yue Wang,
Eric P. Hoffman,
Robert Clarke,
Jianhua Xuan:
Inferring Condition-Specific miRNA-Gene Modules from miRNA and mRNA Profiling Data.
BCBGC 2008: 49-55 |
15 | | Ting Gong,
Jianhua Xuan,
Rebecca B. Riggins,
Yue Wang,
Eric P. Hoffman,
Robert Clarke:
Exploring Transcriptional Modules Through Integrative Gene Clustering Guided by Transcription Factor Binding Information.
BIOCOMP 2008: 191-197 |
14 | | Li Chen,
Jianhua Xuan,
Rebecca B. Riggins,
Yue Wang,
Eric P. Hoffman,
Robert Clarke:
Identification of Condition-specific Regulatory Modules by Multi-level Motif and mRNA Expression Analysis.
BIOCOMP 2008: 23-28 |
13 | EE | Chen Wang,
Jianhua Xuan,
Li Chen,
Po Zhao,
Yue Wang,
Robert Clarke,
Eric P. Hoffman:
Integrative Network Component Analysis for Regulatory Network Reconstruction.
ISBRA 2008: 196-207 |
12 | EE | Ting Gong,
Jianhua Xuan,
Li Chen,
Rebecca B. Riggins,
Yue Wang,
Eric P. Hoffman,
Robert Clarke:
Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information.
ISBRA 2008: 244-255 |
2007 |
11 | | Chen Wang,
Jianhua Xuan,
Ting Gong,
Robert Clarke,
Eric P. Hoffman,
Yue Wang:
Stability-Based Dimension Estimation of ICA with Application to Microarray Data Analysis.
BIOCOMP 2007: 132-138 |
2006 |
10 | | Justin Molineaux,
Jianhua Xuan,
Ting Gong,
Yitan Zhu,
Eric P. Hoffman,
Robert Clarke,
Yue Wang:
ModVis: An information visualization tool for gene module discovery.
CAINE 2006: 24-31 |
9 | EE | Zuyi Wang,
Yue Wang,
Jianhua Xuan,
Yibin Dong,
Marina Bakay,
Yuanjian Feng,
Robert Clarke,
Eric P. Hoffman:
Optimized multilayer perceptrons for molecular classification and diagnosis using genomic data.
Bioinformatics 22(6): 755-761 (2006) |
8 | EE | Jinwook Seo,
Heather Gordish-Dressman,
Eric P. Hoffman:
An interactive power analysis tool for microarray hypothesis testing and generation.
Bioinformatics 22(7): 808-814 (2006) |
2005 |
7 | EE | Jianhua Xuan,
Eric P. Hoffman,
Robert Clarke,
Yue Wang:
Normalization of Microarray Data by Iterative Nonlinear Regression.
BIBE 2005: 267-270 |
2004 |
6 | EE | Jianhua Xuan,
Yibin Dong,
Javed I. Khan,
Eric P. Hoffman,
Robert Clarke,
Yue Wang:
Robust Feature Selection by Weighted Fisher Criterion for Multiclass Prediction in Gene Expression Profiling.
ICPR (2) 2004: 291-294 |
5 | EE | Jinwook Seo,
Marina Bakay,
Yi-Wen Chen,
Sara Hilmer,
Ben Shneiderman,
Eric P. Hoffman:
Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.
Bioinformatics 20(16): 2534-2544 (2004) |
4 | | Josephine Chen,
Po Zhao,
Donald Massaro,
Linda B. Clerch,
Richard R. Almon,
Debra C. DuBois,
William J. Jusko,
Eric P. Hoffman:
The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface.
Nucleic Acids Research 32(Database-Issue): 578-581 (2004) |
2002 |
3 | EE | Rehannah H. A. Borup,
Stefano Toppo,
Yi-Wen Chen,
Tanya M. Teslovich,
Gerolamo Lanfranchi,
Giorgio Valle,
Eric P. Hoffman:
Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs.
BMC Bioinformatics 3: 33 (2002) |
2 | EE | Marina Bakay,
Yi-Wen Chen,
Rehannah H. A. Borup,
Po Zhao,
Kanneboyina Nagaraju,
Eric P. Hoffman:
Sources of variability and effect of experimental approach on expression profiling data interpretation.
BMC Bioinformatics 3: 4 (2002) |
1994 |
1 | | Dhiraj K. Pathak,
Eric P. Hoffman,
Mark Perlin:
Intelligent DNA-Based Molecular Diagnostics Using Linked Genetic Markers.
ISMB 1994: 331-339 |