| 2008 | 
|---|
| 21 | EE | Matthias E. Futschik,
Hanspeter Herzel:
Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis.
Bioinformatics 24(8): 1063-1069 (2008) | 
| 2007 | 
|---|
| 20 |  | Matthias E. Futschik,
Hanspeter Herzel:
Are we Overestimating the Number of Cell-Cycling Genes? The Impact of Background Models.
German Conference on Bioinformatics 2007: 2-14 | 
| 19 | EE | Matthias E. Futschik,
Gautam Chaurasia,
Hanspeter Herzel:
Comparison of human protein-protein interaction maps.
Bioinformatics 23(5): 605-611 (2007) | 
| 18 | EE | Gautam Chaurasia,
Yasir Iqbal,
Christian Hänig,
Hanspeter Herzel,
Erich E. Wanker,
Matthias E. Futschik:
Flexible web-based integration of distributed large-scale human protein interaction maps.
J. Integrative Bioinformatics 4(1):  (2007) | 
| 17 | EE | Matthias E. Futschik,
Gautam Chaurasia,
Anna Tschaut,
Jenny Russ,
M. Madan Babu,
Hanspeter Herzel:
Functional and Transcriptional Coherency of Modules in the Human Protein Interaction Network .
J. Integrative Bioinformatics 4(3):  (2007) | 
| 16 | EE | Gautam Chaurasia,
Yasir Iqbal,
Christian Hänig,
Hanspeter Herzel,
Erich E. Wanker,
Matthias E. Futschik:
UniHI: an entry gate to the human protein interactome.
Nucleic Acids Research 35(Database-Issue): 590-594 (2007) | 
| 2005 | 
|---|
| 15 | EE | Szymon M. Kielbasa,
Didier Gonze,
Hanspeter Herzel:
Measuring similarities between transcription factor binding sites.
BMC Bioinformatics 6: 237 (2005) | 
| 14 | EE | Matthias Truss,
Maciej Swat,
Szymon M. Kielbasa,
Reinhold Schäfer,
Hanspeter Herzel,
Christian Hagemeier:
HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells.
Nucleic Acids Research 33(Database-Issue): 108-111 (2005) | 
| 2004 | 
|---|
| 13 |  | Szymon M. Kielbasa,
Nils Blüthgen,
Hanspeter Herzel:
Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors.
German Conference on Bioinformatics 2004: 105-114 | 
| 12 |  | Nils Blüthgen,
Szymon M. Kielbasa,
Branka Cajavec,
Hanspeter Herzel:
HOMGL - comparing genelists across species and with different accession numbers.
Bioinformatics 20(1): 125-126 (2004) | 
| 11 | EE | Maciej Swat,
Alexander E. Kel,
Hanspeter Herzel:
Bifurcation analysis of the regulatory modules of the mammalian G1/S transition.
Bioinformatics 20(10): 1506-1511 (2004) | 
| 2003 | 
|---|
| 10 |  | Maciej Swat,
Alexander E. Kel,
Szymon M. Kielbasa,
Hanspeter Herzel:
Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules.
German Conference on Bioinformatics 2003: 147-152 | 
| 9 | EE | Olaf Weiss,
Andreas Ziehe,
Hanspeter Herzel:
Optimizing Property Codes in Protein Data Reveals Structural Characteristics.
ICANN 2003: 245-252 | 
| 2001 | 
|---|
| 8 |  | Szymon M. Kielbasa,
Jan O. Korbel,
Dieter Beule,
Johannes Schuchhardt,
Hanspeter Herzel:
Combining frequency and positional information to predict transcription factor binding sites.
Bioinformatics 17(11): 1019-1026 (2001) | 
| 2000 | 
|---|
| 7 |  | Dieter Beule,
Johannes Schuchhardt,
Arif Malik,
Holger Eickhoff,
Hans Lehrach,
Hanspeter Herzel:
Reliability of Microarray Data and Clustering.
German Conference on Bioinformatics 2000: 167-174 | 
| 6 |  | Johannes Schuchhardt,
Liying Dong,
Ulrich Hoffmüller,
Achim Kramer,
Jens Schneider-Mergener,
Hanspeter Herzel:
Peptide Binding Landscapes.
German Conference on Bioinformatics 2000: 183-188 | 
| 5 |  | Szymon M. Kielbasa,
Jan O. Korbel,
Dieter Beule,
Johannes Schuchhardt,
Hanspeter Herzel:
Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search.
German Conference on Bioinformatics 2000: 55-62 | 
| 1999 | 
|---|
| 4 |  | Dirk Holste,
Dieter Beule,
Wolfram Liebermeister,
Johannes Schuchhardt,
Hanspeter Herzel:
Mutual Information Analysis of Surrogate Gene Expression Data.
German Conference on Bioinformatics 1999: 201-204 | 
| 3 |  | Hanspeter Herzel,
Olaf Weiss,
Edward N. Trifonov:
10-11 bp periodicities in complete genomes reflect protein structure and DNA folding.
Bioinformatics 15(3): 187-193 (1999) | 
| 1998 | 
|---|
| 2 |  | Olaf Weiss,
Hanspeter Herzel:
Property Codes in Sets of Protein Sequences.
German Conference on Bioinformatics 1998 | 
| 1 |  | Hanspeter Herzel,
Olaf Weiss,
Edward N. Trifonov:
Sequence Periodicities in Complete Genomes Reflect Supercoiling.
German Conference on Bioinformatics 1998 |