2008 |
16 | EE | Jae-Hyung Lee,
Michael Hamilton,
Colin Gleeson,
Cornelia Caragea,
Peter Zaback,
Jeffry D. Sander,
Xue Li,
Feihong Wu,
Michael Terribilini,
Vasant Honavar,
Drena Dobbs:
Striking Similarities in Diverse Telomerase Proteins Revealed by Combining Structure Prediction and Machine Learning Approaches.
Pacific Symposium on Biocomputing 2008: 501-512 |
2007 |
15 | EE | Cornelia Caragea,
Jivko Sinapov,
Vasant Honavar,
Drena Dobbs:
Assessing the Performance of Macromolecular Sequence Classifiers.
BIBE 2007: 320-326 |
14 | EE | Feihong Wu,
Fadi Towfic,
Drena Dobbs,
Vasant Honavar:
Analysis of Protein Protein Dimeric Interfaces.
BIBM 2007: 35 |
13 | EE | Michael Terribilini,
Jeffry D. Sander,
Jae-Hyung Lee,
Peter Zaback,
Robert L. Jernigan,
Vasant Honavar,
Drena Dobbs:
RNABindR: a server for analyzing and predicting RNA-binding sites in proteins.
Nucleic Acids Research 35(Web-Server-Issue): 578-584 (2007) |
12 | EE | Jeffry D. Sander,
Peter Zaback,
J. Keith Joung,
Daniel F. Voytas,
Drena Dobbs:
Zinc Finger Targeter (ZiFiT): an engineered zinc finger/target site design tool.
Nucleic Acids Research 35(Web-Server-Issue): 599-605 (2007) |
2005 |
11 | EE | Doina Caragea,
Jie Bao,
Jyotishman Pathak,
Adrian Silvescu,
Carson M. Andorf,
Drena Dobbs,
Vasant Honavar:
Information Integration from Semantically Heterogeneous Biological Data Sources.
DEXA Workshops 2005: 580-584 |
10 | EE | Doina Caragea,
Jyotishman Pathak,
Jie Bao,
Adrian Silvescu,
Carson M. Andorf,
Drena Dobbs,
Vasant Honavar:
Information Integration and Knowledge Acquisition from Semantically Heterogeneous Biological Data Sources.
DILS 2005: 175-190 |
9 | EE | Michael Terribilini,
Jae-Hyung Lee,
Changhui Yan,
Robert L. Jernigan,
Susan Carpenter,
Vasant Honavar,
Drena Dobbs:
Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and Rna Binding Sites in Rev Proteins of Hiv-1 and Eiav Agree with Experimental Data
CoRR abs/cs/0511075: (2005) |
2004 |
8 | EE | Changhui Yan,
Drena Dobbs,
Vasant Honavar:
A two-stage classifier for identification of protein-protein interface residues.
ISMB/ECCB (Supplement of Bioinformatics) 2004: 371-378 |
7 | EE | Taner Z. Sen,
Andrzej Kloczkowski,
Robert L. Jernigan,
Changhui Yan,
Vasant Honavar,
Kai-Ming Ho,
Cai-Zhuang Wang,
Yungok Ihm,
Haibo Cao,
Xun Gu,
Drena Dobbs:
Predicting binding sites of hydrolase-inhibitor complexes by combining several methods.
BMC Bioinformatics 5: 205 (2004) |
6 | EE | Changhui Yan,
Vasant Honavar,
Drena Dobbs:
Identification of interface residues in protease-inhibitor and antigen-antibody complexes: a support vector machine approach.
Neural Computing and Applications 13(2): 123-129 (2004) |
2003 |
5 | EE | Xiangyun Wang,
Diane Schroeder,
Drena Dobbs,
Vasant Honavar:
Automated data-driven discovery of motif-based protein function classifiers.
Inf. Sci. 155(1-2): 1-18 (2003) |
2002 |
4 | | Xiangyun Wang,
Diane Schroeder,
Drena Dobbs,
Vasant Honavar:
Data-Driven Discovery of Protein Function Classifiers: Decision Trees Based on MEME Motifs outperform PROSITE Patterns and Profiles on Peptidase Families.
JCIS 2002: 1193-1199 |
3 | | Carson M. Andorf,
Drena Dobbs,
Vasant Honavar:
Discovering Protein Function Classification Rules from Reduced Alphabet Representations of Protein Sequences.
JCIS 2002: 1200-1206 |
1999 |
2 | EE | Jihoon Yang,
Rajesh Parekh,
Vasant Honavar,
Drena Dobbs:
Data-Driven Theory Refinement Using KBDistAl.
IDA 1999: 331-342 |
1994 |
1 | | Drena Dobbs,
Wen-Ling Shaiu,
Robert M. Benbow:
Modular sequence elements associated with origin regions in eukaryotic chromosomal DNA.
Nucleic Acids Research 22(13): 2479-2489 (1994) |