Piotr Cieplak

2008
11	EE	François-Yves Dupradeau, Christine Cézard, Rodolphe Lelong, Élodie Stanislawiak, Julien Pêcher, Jean Charles Delepine, Piotr Cieplak: R.E.DD.B.: A database for RESP and ESP atomic charges, and force field libraries. Nucleic Acids Research 36(Database-Issue): 360-367 (2008)
2006
10	EE	Zhi-Xiang Wang, Wei Zhang, Chun Wu, Hongxing Lei, Piotr Cieplak, Yong Duan: Strike a balance: Optimization of backbone torsion parameters of AMBER polarizable force field for simulations of proteins and peptides. Journal of Computational Chemistry 27(6): 781-790 (2006)
9	EE	Zhi-Xiang Wang, Wei Zhang, Chun Wu, Hongxing Lei, Piotr Cieplak, Yong Duan: Erratum - Strike a balance: Optimization of backbone torsion parameters of AMBER polarizable force field for simulations of proteins and peptides. Journal of Computational Chemistry 27(8): 994 (2006)
2003
8	EE	Yong Duan, Chun Wu, Shibasish Chowdhury, Mathew C. Lee, Guoming Xiong, Wei Zhang, Rong Yang, Piotr Cieplak, Ray Luo, Taisung Lee, James W. Caldwell, Junmei Wang, Peter A. Kollman: A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations. Journal of Computational Chemistry 24(16): 1999-2012 (2003)
7		Adam Jarmula, Piotr Cieplak, Andrzej Les, Wojciech Rode: Relative free energies of binding to thymidylate synthase of 2- and/or 4-thio and/or 5-fluoro analogues of dUMP. Journal of Computer-Aided Molecular Design 17(10): 699-710 (2003)
2002
6	EE	Marek Orzechowski, Piotr Cieplak, Lucjan Piela: Theoretical calculation of the coiled-coil stability in water in the context of its possible use as a molecular rack. Journal of Computational Chemistry 23(1): 106-110 (2002)
2001
5	EE	Piotr Cieplak, James W. Caldwell, Peter A. Kollman: Molecular mechanical models for organic and biological systems going beyond the atom centered two body additive approximation: aqueous solution free energies of methanol and N-methyl acetamide, nucleic acid base, and amide hydrogen bonding and chloroform/water partition coefficients of the nucleic acid bases. Journal of Computational Chemistry 22(10): 1048-1057 (2001)
2000
4	EE	Junmei Wang, Piotr Cieplak, Peter A. Kollman: How well does a restrained electrostatic potential (RESP) model perform in calculating conformational energies of organic and biological molecules? Journal of Computational Chemistry 21(12): 1049-1074 (2000)
1995
3		Piotr Cieplak, Wendy D. Cornell, Christopher I. Bayly, Peter A. Kollman: Application of the Multimolecule and Multiconformational RESP Methodology to Biopolymers: Charge Derication for DNA, RNA, and Proteins. Journal of Computational Chemistry 16(11): 1357-1376 (1995)
2		Allison E. Howard, Piotr Cieplak, Peter A. Kollman: A Molecular Mechanical Model That Reproduces the Relative Energies for Chair and Twist-Boat Conformations of 1, 3-Dioxanes. Journal of Computational Chemistry 16(2): 243-262 (1995)
1993
1		Piotr Cieplak, Peter A. Kollman: Peptide mimetics as enzyme inhibitors: Use of free energy perturbation calculations to evaluate isosteric replacement for amide bonds in a potent HIV protease inhibitor. Journal of Computer-Aided Molecular Design 7(3): 291-304 (1993)

Coauthor Index

1	Christopher I. Bayly	[3]
2	James W. Caldwell	[5] [8]
3	Christine Cézard	[11]
4	Shibasish Chowdhury	[8]
5	Wendy D. Cornell	[3]
6	Jean Charles Delepine	[11]
7	Yong Duan	[8] [9] [10]
8	François-Yves Dupradeau	[11]
9	Allison E. Howard	[2]
10	Adam Jarmula	[7]
11	Peter A. Kollman	[1] [2] [3] [4] [5] [8]
12	Mathew C. Lee	[8]
13	Taisung Lee	[8]
14	Hongxing Lei	[9] [10]
15	Rodolphe Lelong	[11]
16	Andrzej Les	[7]
17	Ray Luo	[8]
18	Marek Orzechowski	[6]
19	Julien Pêcher	[11]
20	Lucjan Piela	[6]
21	Wojciech Rode	[7]
22	Élodie Stanislawiak	[11]
23	Junmei Wang	[4] [8]
24	Zhi-Xiang Wang	[9] [10]
25	Chun Wu	[8] [9] [10]
26	Guoming Xiong	[8]
27	Rong Yang	[8]
28	Wei Zhang	[8] [9] [10]

Colors in the list of coauthors