Craig J. Benham

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17EEConrad A. Nieduszynski, Shin-ichiro Hiraga, Prashanth Ak, Craig J. Benham, Anne D. Donaldson: OriDB: a DNA replication origin database. Nucleic Acids Research 35(Database-Issue): 40-46 (2007)
16EEHuiquan Wang, Craig J. Benham: Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress. BMC Bioinformatics 7: 248 (2006)
15EEHuiquan Wang, Miroslava Kaloper, Craig J. Benham: SIDDBASE: a database containing the stress-induced DNA duplex destabilization (SIDD) profiles of complete microbial genomes. Nucleic Acids Research 34(Database-Issue): 373-378 (2006)
14EEHuiquan Wang, Craig J. Benham: Annotation of Promoter Regions in Microbial Genomes Based on DNA Structural and Sequence Properties. Systems Biology and Regulatory Genomics 2005: 212-224
13 Huiquan Wang, Craig J. Benham: Superhelically Destabilized Sites in the E. coli Genome: Implications for Promoter Prediction in Prokaryotes. German Conference on Bioinformatics 2004: 217-226
12EECraig J. Benham, Chengpeng Bi: The Analysis of Stress-Induced Duplex Destabilization in Long Genomic DNA Sequences. Journal of Computational Biology 11(4): 519-543 (2004)
11EEChengpeng Bi, Craig J. Benham: The Approximate Algorithm for Analysis of the Strand Separation Transition in Super helical DNA Using Nearest Neighbor Energetics. CSB 2003: 460-461
10 S. Goetze, A. Knopp, Craig J. Benham, Stephen A. Krawetz, Jürgen Bode: Biomathematical and in vitro analysis of destabilized regions in the interferon gene cluster. German Conference on Bioinformatics 2001: 161
9 A. Knopp, S. Goetze, Craig J. Benham, Matthias Frisch, Stephen A. Krawetz, Jürgen Bode: Analysis of biomathematically predicted Scaffold / Matrix Attached Regions (S/MARs) by three different approaches. German Conference on Bioinformatics 2001: 200
8 Craig J. Benham: In Silico Biology: The emergence of a new biological methodology. HERCMA 2001: 91
7EECraig J. Benham: Stress-Induced DNA Duplex Destabilization in Transcriptional Initiation. Pacific Symposium on Biocomputing 2001: 103-114
6EERichard M. Fye, Craig J. Benham: A formally exact method to numerically analyze local denaturation in superhelical DNA. RECOMB 1998: 79-84
5 Gabriela Hristescu, Craig J. Benham, Martin Farach: DNA Strand Separation Prediction: A Parallel Implementation. PDPTA 1997: 610-619
4 Craig J. Benham: Sites of Superhelical DNA Duplex Destabilization occour at Specific Regulatory Regions. German Conference on Bioinformatics 1996: 46-52
3 Craig J. Benham: Computation of DNA structural variability - a new predictor of DNA regulatory regions. Computer Applications in the Biosciences 12(5): 375-381 (1996)
2 Craig J. Benham, Sampath Kannan, Tandy Warnow: Of Chicken Teeth and Mouse Eyes, or Generalized Character Compatibility. CPM 1995: 17-26
1 Craig J. Benham, Sampath Kannan, Michael Paterson, Tandy Warnow: Hen's Teeth and Whale's Feet: Generalized Characters and Their Compatibility. Journal of Computational Biology 2(4): 515-525 (1995)

Coauthor Index

1Prashanth Ak [17]
2Chengpeng Bi [11] [12]
3Jürgen Bode [9] [10]
4Anne D. Donaldson [17]
5Martin Farach-Colton (Martin Farach) [5]
6Matthias Frisch [9]
7Richard M. Fye [6]
8S. Goetze [9] [10]
9Shin-ichiro Hiraga [17]
10Gabriela Hristescu [5]
11Miroslava Kaloper [15]
12Sampath Kannan [1] [2]
13A. Knopp [9] [10]
14Stephen A. Krawetz [9] [10]
15Conrad A. Nieduszynski [17]
16Michael Paterson [1]
17Huiquan Wang [13] [14] [15] [16]
18Tandy Warnow [1] [2]

Colors in the list of coauthors

Copyright © Sun May 17 03:24:02 2009 by Michael Ley (ley@uni-trier.de)