Danny Barash

2007
19	EE	Shahar Michal, Tor Ivry, Omer Cohen, Moshe Sipper, Danny Barash: Finding a Common Motif of RNA Sequences Using Genetic Programming: The GeRNAMo System. IEEE/ACM Trans. Comput. Biology Bioinform. 4(4): 596-610 (2007)
18	EE	Isana Veksler-Lublinsky, Michal Ziv-Ukelson, Danny Barash, Klara Kedem: A Structure-Based Flexible Search Method for Motifs in RNA. Journal of Computational Biology 14(7): 908-926 (2007)
2006
17	EE	Alexander Churkin, Danny Barash: RNAmute: RNA secondary structure mutation analysis tool. BMC Bioinformatics 7: 221 (2006)
2005
16	EE	Alexander Churkin, Ornit Elgad, Oshrat Petgho, Danny Barash: RNAMute: RNA Secondary Structure Mutation Analysis Tool. CSB Workshops 2005: 139-141
15	EE	Adaya N. Cohen, Klara Kedem, Michal Shapira, Danny Barash: Integration of RNA Search methods for Identifying Novel Riboswitch Patterns in Eukaryotes. CSB Workshops 2005: 193-195
14	EE	Assaf Avihoo, Danny Barash: Temperature and Mutation Switches in the Secondary Structure of Small RNAs. CSB Workshops 2005: 235-238
2004
13	EE	Danny Barash, Dorin Comaniciu: Meanshift Clustering for DNA Microarray Analysis. CSB 2004: 578-579
12	EE	Oriel Bergig, Danny Barash, Klara Kedem: RNA Motif Search Using the Structure to String (STR2) Method. CSB 2004: 660-661
11	EE	Assaf Avihoo, Nir Dromi, Danny Barash: Fine-Grain Matrix Graph Representation for Predicting Mutations Leading to Conformational Rearrangements in Small RNAs. CSB 2004: 724-725
10	EE	Danny Barash: Second eigenvalue of the Laplacian matrix for predicting RNA conformational switch by mutation. Bioinformatics 20(12): 1861-1869 (2004)
9	EE	Danny Barash, Dorin Comaniciu: A common framework for nonlinear diffusion, adaptive smoothing, bilateral filtering and mean shift. Image Vision Comput. 22(1): 73-81 (2004)
8	EE	Oriel Bergig, Danny Barash, Evgeny Nudler, Klara Kedem: STR2: A structure to string approach for locating G-box riboswitch shapes in pre-selected genes. In Silico Biology 4: (2004)
7	EE	Danny Barash: Spectral Decomposition for the Search and Analysis of RNA Secondary Structure. Journal of Computational Biology 11(6): 1169-1174 (2004)
2003
6	EE	Danny Barash: Spectral Decomposition of the Laplacian Matrix Applied to RNA Folding Prediction. CSB 2003: 602-603
5	EE	Danny Barash, Dorin Comaniciu: A Common Viewpoint on Broad Kernel Filtering and Nonlinear Diffusion. Scale-Space 2003: 683-698
4	EE	Danny Barash, Linjing Yang, Xiaoliang Qian, Tamar Schlick: Inherent speedup limitations in multiple time step/particle mesh Ewald algorithms. Journal of Computational Chemistry 24(1): 77-88 (2003)
2002
3	EE	Danny Barash: A Fundamental Relationship between Bilateral Filtering, Adaptive Smoothing, and the Nonlinear Diffusion Equation. IEEE Trans. Pattern Anal. Mach. Intell. 24(6): 844-847 (2002)
2001
2	EE	Danny Barash: Bilateral Filtering and Anisotropic Diffusion: Towards a Unified Viewpoint. Scale-Space 2001: 273-280
1	EE	Danny Barash, Moshe Israeli, Ron Kimmel: An Accurate Operator Splitting Scheme for Nonlinear Diffusion Filtering. Scale-Space 2001: 281-289

Coauthor Index

1	Assaf Avihoo	[11] [14]
2	Oriel Bergig	[8] [12]
3	Alexander Churkin	[16] [17]
4	Adaya N. Cohen	[15]
5	Omer Cohen	[19]
6	Dorin Comaniciu	[5] [9] [13]
7	Nir Dromi	[11]
8	Ornit Elgad	[16]
9	Moshe Israeli	[1]
10	Tor Ivry	[19]
11	Klara Kedem	[8] [12] [15] [18]
12	Ron Kimmel	[1]
13	Shahar Michal	[19]
14	Evgeny Nudler	[8]
15	Oshrat Petgho	[16]
16	Xiaoliang Qian	[4]
17	Tamar Schlick	[4]
18	Michal Shapira	[15]
19	Moshe Sipper	[19]
20	Isana Veksler-Lublinsky	[18]
21	Linjing Yang	[4]
22	Michal Ziv-Ukelson	[18]

Colors in the list of coauthors