International Journal of Data Mining and Bioinformatics, Volume 2

Volume 2, Number 1, 2008

• Fang-Xiang Wu:
  Gene Regulatory Network modelling: a state-space approach. 1-14
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• Rong Jiang, Hong Yan:
  Segmentation of short human exons based on spectral features of double curves. 15-35
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• Nicolas Turenne, Sylviane R. Schwer:
  Temporal representation for gene networks: towards a qualitative temporal data mining. 36-53
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• Peddinti V. Gopalacharyulu, Erno Lindfors, Jarkko Miettinen, Catherine Bounsaythip, Matej Oresic:
  An integrative approach for biological data mining and visualisation. 54-77
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• Xuezheng Fu, Hao Wang, Robert W. Harrison, William L. Harrison:
  A rule-based approach for RNA pseudoknot prediction. 78-93
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Volume 2, Number 2, 2008

• Huimin Geng, Xutao Deng, Hesham H. Ali:
  Message Passing Clustering (MPC): a knowledge-based framework for clustering under biological constraints. 95-120
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• Jack Y. Yang, Mary Qu Yang:
  Identification of Intrinsically Unstructured Proteins using hierarchical classifier. 121-133
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• Li-Juan Zhang, Zhou-Jun Li, Huo-Wang Chen:
  Handling gene redundancy in microarray data using Grey Relational Analysis. 134-144
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• Xue-wen Chen, Bing Han, Jianwen Fang, Ryan J. Haasl:
  Large-scale Protein-Protein Interaction prediction using novel kernel methods. 145-156
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• Pai-Hsi Huang, Vladimir Pavlovic:
  Protein homology detection with biologically inspired features and interpretable statistical models. 157-175
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• Hyun-Woo Cho, Seoung Bum Kim, Myong Kee Jeong, Youngja Park, Nana Gletsu Miller, Thomas R. Ziegler, Dean P. Jones:
  Discovery of metabolite features for the modelling and analysis of high-resolution NMR spectra. 176-192
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Volume 2, Number 3, 2008

• Bill Andreopoulos, Dimitra Alexopoulou, Michael Schroeder:
  Word Sense Disambiguation in biomedical ontologies with term co-occurrence analysis and document clustering. 193-215
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• Spiridon C. Denaxas, Christos Tjortjis:
  Scoring and summarising gene product clusters using the Gene Ontology. 216-235
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• Weixiang Liu, Kehong Yuan:
  Sparse p-norm Nonnegative Matrix Factorization for clustering gene expression data. 236-249
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• Rong Jin, Luo Si, Christina Chan:
  A Bayesian framework for knowledge driven regression model in micro-array data analysis. 250-267
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