2005 |
18 | EE | Dmitriy Leyfer,
Zhiping Weng:
Genome-wide decoding of hierarchical modular structure of transcriptional regulation by cis-element and expression clustering.
ECCB/JBI 2005: 203 |
17 | EE | Joseph D. Szustakowski,
Simon Kasif,
Zhiping Weng:
Less is more: towards an optimal universal description of protein folds.
ECCB/JBI 2005: 71 |
16 | EE | Brian Pierce,
Weiwei Tong,
Zhiping Weng:
M-ZDOCK: a grid-based approach for Cn symmetric multimer docking.
Bioinformatics 21(8): 1472-1478 (2005) |
15 | EE | Ying Xu,
Liming Cai,
Zhiping Weng:
Preface.
J. Comput. Sci. Technol. 20(4): 433-433 (2005) |
14 | EE | Peter M. Haverty,
Zhiping Weng,
Ulla Hansen:
Transcriptional Regulatory Networks Activated by PI3K and ERK Transduced Growth Signals in Human Glioblastoma Cells.
J. Comput. Sci. Technol. 20(4): 439-445 (2005) |
2004 |
13 | EE | Peter M. Haverty,
Zhiping Weng:
CisML: an XML-based format for sequence motif detection software.
Bioinformatics 20(11): 1815-1817 (2004) |
12 | EE | Peter M. Haverty,
Li-Li Hsiao,
Steven R. Gullans,
Ulla Hansen,
Zhiping Weng:
Limited agreement among three global gene expression methods highlights the requirement for non-global validation.
Bioinformatics 20(18): 3431-3441 (2004) |
11 | | Anason S. Halees,
Zhiping Weng:
PromoSer: improvements to the algorithm, visualization and accessibility.
Nucleic Acids Research 32(Web-Server-Issue): 191-194 (2004) |
10 | | Peter M. Haverty,
Martin C. Frith,
Zhiping Weng:
CARRIE web service: automated transcriptional regulatory network inference and interactive analysis.
Nucleic Acids Research 32(Web-Server-Issue): 213-216 (2004) |
9 | | Zhenjun Hu,
Yutao Fu,
Anason S. Halees,
Szymon M. Kielbasa,
Zhiping Weng:
SeqVISTA: a new module of integrated computational tools for studying transcriptional regulation.
Nucleic Acids Research 32(Web-Server-Issue): 235-241 (2004) |
8 | | Yutao Fu,
Martin C. Frith,
Peter M. Haverty,
Zhiping Weng:
MotifViz: an analysis and visualization tool for motif discovery.
Nucleic Acids Research 32(Web-Server-Issue): 420-423 (2004) |
2003 |
7 | EE | Zhenjun Hu,
Martin C. Frith,
Tianhua Niu,
Zhiping Weng:
SeqVISTA: a graphical tool for sequence feature visualization and comparison.
BMC Bioinformatics 4: 1 (2003) |
6 | | Björn Peters,
Weiwei Tong,
John Sidney,
Alessandro Sette,
Zhiping Weng:
Examining the independent binding assumption for binding of peptide epitopes to MHC-I molecules.
Bioinformatics 19(14): 1765-1772 (2003) |
5 | | Anason S. Halees,
Dmitriy Leyfer,
Zhiping Weng:
PromoSer: a large-scale mammalian promoter and transcription start site identification service.
Nucleic Acids Research 31(13): 3554-3559 (2003) |
4 | | Martin C. Frith,
Michael C. Li,
Zhiping Weng:
Cluster-Buster: finding dense clusters of motifs in DNA sequences.
Nucleic Acids Research 31(13): 3666-3668 (2003) |
3 | EE | Zhiping Weng:
Managing Biological Sequence and Protein Structure Data.
OMICS 7(1): 25-26 (2003) |
2002 |
2 | | Peter M. Haverty,
Zhiping Weng,
Nathan L. Best,
Kenneth R. Auerbach,
Li-Li Hsiao,
Roderick V. Jensen,
Steven R. Gullans:
HugeIndex: a database with visualization tools for high-density oligonucleotide array data from normal human tissues.
Nucleic Acids Research 30(1): 214-217 (2002) |
2001 |
1 | | Martin C. Frith,
Ulla Hansen,
Zhiping Weng:
Detection of cis -element clusters in higher eukaryotic DNA.
Bioinformatics 17(10): 878-889 (2001) |