| 2008 |
|---|
| 12 | EE | Marina Barsky,
Ulrike Stege,
Alex Thomo,
Chris Upton:
A new method for indexing genomes using on-disk suffix trees.
CIKM 2008: 649-658 |
| 11 | EE | Marina Barsky,
Ulrike Stege,
Alex Thomo,
Chris Upton:
A graph approach to the threshold all-against-all substring matching problem.
ACM Journal of Experimental Algorithmics 12: (2008) |
| 2007 |
|---|
| 10 | EE | Marina Barsky,
Ulrike Stege,
Alex Thomo,
Chris Upton:
Shortest Path Approaches for the Longest Common Subsequence of a Set of Strings.
BIBE 2007: 327-333 |
| 2006 |
|---|
| 9 | EE | Marina Barsky,
Ulrike Stege,
Alex Thomo,
Chris Upton:
A New Algorithm for Fast All-Against-All Substring Matching.
SPIRE 2006: 360-366 |
| 8 | EE | Melissa Da Silva,
Ling Shen,
Vasily Tcherepanov,
Cristalle Watson,
Chris Upton:
Predicted function of the vaccinia virus G5R protein.
Bioinformatics 22(23): 2846-2850 (2006) |
| 2005 |
|---|
| 7 | EE | Joe Whitney,
David J. Esteban,
Chris Upton:
Recent Hits Acquired by BLAST (ReHAB): A tool to identify new hits in sequence similarity searches.
BMC Bioinformatics 6: 23 (2005) |
| 6 | EE | Elliot J. Lefkowitz,
Chris Upton,
Shankar S. Changayil,
Charles Buck,
Paula Traktman,
R. Mark L. Buller:
Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource.
Nucleic Acids Research 33(Database-Issue): 311-316 (2005) |
| 2004 |
|---|
| 5 | EE | Ryan Brodie,
Alex J. Smith,
Rachel L. Roper,
Vasily Tcherepanov,
Chris Upton:
Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments.
BMC Bioinformatics 5: 96 (2004) |
| 4 | EE | Ryan Brodie,
Rachel L. Roper,
Chris Upton:
JDotter: a Java interface to multiple dotplots generated by dotter.
Bioinformatics 20(2): 279-281 (2004) |
| 2002 |
|---|
| 3 | | Angelika Ehlers,
John Osborne,
Stephanie Slack,
Rachel L. Roper,
Chris Upton:
Poxvirus Orthologous Clusters (POCs).
Bioinformatics 18(11): 1544-1545 (2002) |
| 2000 |
|---|
| 2 | | Matthew Boone,
Chris Upton:
BLAST Search Updater: a notification system for new database matches.
Bioinformatics 16(11): 1054-1055 (2000) |
| 1 | | David Hiscock,
Chris Upton:
Viral Genome DataBase: storing and analyzing genes and proteins from complete viral genomes.
Bioinformatics 16(5): 484-485 (2000) |
