2008 |
22 | EE | Xiaojiang Xu,
Yingdong Zhao,
Richard Simon:
Gene Set Expression Comparison kit for BRB-ArrayTools.
Bioinformatics 24(1): 137-139 (2008) |
2006 |
21 | EE | Sudhir Varma,
Richard Simon:
Bias in error estimation when using cross-validation for model selection.
BMC Bioinformatics 7: 91 (2006) |
2005 |
20 | EE | Yingdong Zhao,
Ming-Chung Li,
Richard Simon:
An adaptive method for cDNA microarray normalization.
BMC Bioinformatics 6: 28 (2005) |
19 | EE | Kevin Dobbin,
Joanna H. Shih,
Richard Simon:
Comment on 'Evaluation of the gene-specific dye bias in cDNA microarray experiments'.
Bioinformatics 21(12): 2803-2804 (2005) |
18 | EE | Annette M. Molinaro,
Richard Simon,
Ruth M. Pfeiffer:
Prediction error estimation: a comparison of resampling methods.
Bioinformatics 21(15): 3301-3307 (2005) |
2004 |
17 | EE | Sudhir Varma,
Richard Simon:
Iterative class discovery and feature selection using Minimal Spanning Trees.
BMC Bioinformatics 5: 126 (2004) |
16 | EE | Myong-Hee Sung,
Richard Simon:
Genomewide Conserved Epitope Profiles of HIV-1 Predicted by Biophysical Properties of MHC Binding Peptides.
Journal of Computational Biology 11(1): 125-145 (2004) |
2003 |
15 | EE | Taesung Park,
Sung-Gon Yi,
Sung-Hyun Kang,
Seung Yeoun Lee,
Yong-Sung Lee,
Richard Simon:
Evaluation of normalization methods for microarray data.
BMC Bioinformatics 4: 33 (2003) |
14 | | Yingdong Zhao,
Clemencia Pinilla,
Danila Valmori,
Roland Martin,
Richard Simon:
Application of support vector machines for T-cell epitopes prediction.
Bioinformatics 19(15): 1978-1984 (2003) |
13 | | George W. Wright,
Richard Simon:
A random variance model for detection of differential gene expression in small microarray experiments.
Bioinformatics 19(18): 2448-2455 (2003) |
12 | | Kevin Dobbin,
Joanna H. Shih,
Richard Simon:
Statistical Design of Reverse Dye Microarrays.
Bioinformatics 19(7): 803-810 (2003) |
11 | | Michael D. Radmacher,
Lisa M. McShane,
Richard Simon:
A Paradigm for Class Prediction Using Gene Expression Profiles.
Journal of Computational Biology 9(3): 505-512 (2003) |
10 | | Myong-Hee Sung,
Yingdong Zhao,
Roland Martin,
Richard Simon:
T-Cell Epitope Prediction with Combinatorial Peptide Libraries.
Journal of Computational Biology 9(3): 527-540 (2003) |
9 | EE | Richard Simon:
Supervised analysis when the number of candidate features (p) greatly exceeds the number of cases (n).
SIGKDD Explorations 5(2): 31-36 (2003) |
2002 |
8 | | Kevin Dobbin,
Richard Simon:
Comparison of microarray designs for class comparison and class discovery.
Bioinformatics 18(11): 1438-1445 (2002) |
7 | | Lisa M. McShane,
Michael D. Radmacher,
Boris Freidlin,
Ren Yu,
Ming-Chung Li,
Richard Simon:
Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data.
Bioinformatics 18(11): 1462-1469 (2002) |
6 | | Mary E. Edgerton,
Ronald C. Taylor,
John I. Powell,
Lawrence Hunter,
Richard Simon,
Edison T. Liu:
A bioinformatics tool to select sequences for microarray studies of mouse models of oncogenesis.
Bioinformatics 18(5): 774-775 (2002) |
2001 |
5 | EE | Yingdong Zhao,
Lenny Grover,
Richard Simon:
TEST: A Web-Based T-Cell Epitope Search Tool.
CBMS 2001: 493-497 |
4 | | Lawrence Hunter,
Ronald C. Taylor,
Sonia M. Leach,
Richard Simon:
GEST: a gene expression search tool based on a novel Bayesian similarity metric.
ISMB (Supplement of Bioinformatics) 2001: 115-122 |
1999 |
3 | EE | Mary Ellen Zurko,
Richard Simon,
Tom Sanfilippo:
A User-Centered, Modular Authorization Service Built on an RBAC Foundation.
IEEE Symposium on Security and Privacy 1999: 57-71 |
1997 |
2 | EE | Richard Simon,
Mary Ellen Zurko:
Separation of Duty in Role-based Environments.
CSFW 1997: 183-194 |
1971 |
1 | EE | Richard Simon,
Richard C. T. Lee:
On the Optimal Solutions to AND/OR Series-Parallel Graphs.
J. ACM 18(2): 354-372 (1971) |