| 2007 | 
|---|
| 29 | EE | Cleber V. G. Mira,
Joao Meidanis:
Sorting by Block-Interchanges and Signed Reversals.
ITNG 2007: 670-676 | 
| 28 | EE | Liliana Alcón,
Márcia R. Cerioli,
Celina M. Herrera de Figueiredo,
Marisa Gutierrez,
João Meidanis:
Tree loop graphs.
Discrete Applied Mathematics 155(6-7): 686-694 (2007) | 
| 2005 | 
|---|
| 27 | EE | Liliana Alcón,
Márcia R. Cerioli,
Celina M. Herrera de Figueiredo,
Marisa Gutierrez,
João Meidanis:
Non loop graphs with induced cycles.
Electronic Notes in Discrete Mathematics 19: 289-295 (2005) | 
| 26 | EE | Guilherme P. Telles,
João Meidanis:
Building PQR trees in almost-linear time.
Electronic Notes in Discrete Mathematics 19: 33-39 (2005) | 
| 25 | EE | Liliana Alcón,
Márcia R. Cerioli,
Celina M. Herrera de Figueiredo,
Marisa Gutierrez,
João Meidanis:
Loop Graphs and Asteroidal Sets.
Electronic Notes in Discrete Mathematics 22: 179-183 (2005) | 
| 2004 | 
|---|
| 24 | EE | Liliana Alcón,
Celina M. Herrera de Figueiredo,
Márcia R. Cerioli,
Marisa Gutierrez,
João Meidanis:
Tree Loop Graphs.
Electronic Notes in Discrete Mathematics 18: 17-23 (2004) | 
| 2003 | 
|---|
| 23 | EE | João Meidanis:
Current Challenges in Bioinformatics.
SPIRE 2003: 16-27 | 
| 22 |  | Zanoni Dias,
João Meidanis:
The Syntenic Distance Problem Using Only Fusions and Fussions.
WOB 2003: 72-79 | 
| 21 |  | Marisa Gutierrez,
João Meidanis:
Recognizing clique graphs of directed edge path graphs.
Discrete Applied Mathematics 126(2-3): 297-304 (2003) | 
| 20 | EE | Celina M. Herrera de Figueiredo,
João Meidanis,
Célia Picinin de Mello,
Carmen Ortiz:
Decompositions for the edge colouring of reduced indifference graphs.
Theor. Comput. Sci. 297(1-3): 145-155 (2003) | 
| 2002 | 
|---|
| 19 | EE | Marília D. V. Braga,
Joao Meidanis:
An Algorithm That Builds a Set of Strings Given Its Overlap Graph.
LATIN 2002: 52-63 | 
| 18 | EE | Zanoni Dias,
João Meidanis:
Sorting by Prefix Transpositions.
SPIRE 2002: 65-76 | 
| 17 |  | Marisa Gutierrez,
João Meidanis:
On clique graph recognition.
Ars Comb. 63:  (2002) | 
| 16 |  | João Meidanis,
Maria Emilia Telles Walter,
Zanoni Dias:
A Lower Bound on the Reversal and Transposition Diameter.
Journal of Computational Biology 9(5): 743-746 (2002) | 
| 2001 | 
|---|
| 15 |  | Zanoni Dias,
João Meidanis:
Genome Rearrangements Distance by Fusion, Fission, and Transposition is Easy.
SPIRE 2001: 250-253 | 
| 14 | EE | Marisa Gutierrez,
Joao Meidanis:
The Clique Operator, Set Families, and Their Properties.
Electronic Notes in Discrete Mathematics 7: 94-97 (2001) | 
| 13 |  | Marisa Gutierrez,
João Meidanis:
Algebraic theory for the clique operator.
J. Braz. Comp. Soc. 7(3): 53-64 (2001) | 
| 2000 | 
|---|
| 12 | EE | Maria Emilia Telles Walter,
Zanoni Dias,
João Meidanis:
A New Approach for Approximating the Tranposition Distance.
SPIRE 2000: 199-208 | 
| 1999 | 
|---|
| 11 | EE | Celina M. Herrera de Figueiredo,
João Meidanis,
Célia Picinin de Mello:
Total-Chromatic Number and Chromatic Index of Dually Chordal Graphs.
Inf. Process. Lett. 70(3): 147-152 (1999) | 
| 1998 | 
|---|
| 10 | EE | Marisa Gutierrez,
João Meidanis:
On the Clique Operator.
LATIN 1998: 261-272 | 
| 9 |  | Maria Emilia Telles Walter,
Zanoni Dias,
João Meidanis:
Reversal and Transposition Distance of Linear Chromosomes.
SPIRE 1998: 96-102 | 
| 8 | EE | Joao Meidanis,
Oscar Porto,
Guilherme P. Telles:
On the Consecutive Ones Property.
Discrete Applied Mathematics 88(1-3): 325-354 (1998) | 
| 1997 | 
|---|
| 7 | EE | Celina M. Herrera de Figueiredo,
João Meidanis,
Célia Picinin de Mello:
On Edge-Colouring Indifference Graphs.
Theor. Comput. Sci. 181(1): 91-106 (1997) | 
| 1996 | 
|---|
| 6 |  | Joao Meidanis,
Gottfried Vossen,
Mathias Weske:
Using Workflow Management in DNA Sequencing.
CoopIS 1996: 114-123 | 
| 1995 | 
|---|
| 5 |  | Celina M. Herrera de Figueiredo,
João Meidanis,
Célia Picinin de Mello:
On Edge-Colouring Indifference Graphs.
LATIN 1995: 286-299 | 
| 4 |  | Joao Meidanis,
João C. Setubal:
Multiple Alignment of Biological Sequences with Gap Flexibility.
LATIN 1995: 411-426 | 
| 3 | EE | Celina M. Herrera de Figueiredo,
João Meidanis,
Célia Picinin de Mello:
A Linear-Time Algorithm for Proper Interval Graph Recognition.
Inf. Process. Lett. 56(3): 179-184 (1995) | 
| 1992 | 
|---|
| 2 |  | Deborah Joseph,
Joao Meidanis,
Prasoon Tiwari:
Determining DNA Sequence Similarity Using Maximum Independent Set Algorithms for Interval Graphs.
SWAT 1992: 326-337 | 
| 1991 | 
|---|
| 1 |  | Joao Meidanis:
Lower Bounds for Arithmetic Problems.
Inf. Process. Lett. 38(2): 83-87 (1991) |