2009 |
18 | EE | Daniel R. Ripoll,
Adam Liwo,
Harold A. Scheraga:
Global Optimization in Protein Folding.
Encyclopedia of Optimization 2009: 1392-1411 |
2005 |
17 | EE | Joanna Makowska,
Mariusz Makowski,
Adam Liwo,
Lech Chmurzynski:
Theoretical calculations of homoconjugation equilibrium constants in systems modeling acid-base interactions in side chains of biomolecules using the potential of mean force.
Journal of Computational Chemistry 26(3): 235-242 (2005) |
2002 |
16 | EE | Harold A. Scheraga,
Jaroslaw Pillardy,
Adam Liwo,
Jooyoung Lee,
Cezary Czaplewski,
Daniel R. Ripoll,
William J. Wedemeyer,
Yelena A. Arnautova:
Evolution of physics-based methodology for exploring the conformational energy landscape of proteins.
Journal of Computational Chemistry 23(1): 28-34 (2002) |
15 | EE | Maciej Bobrowski,
Adam Liwo,
Stanislaw Oldziej,
Danuta Jeziorek,
Tadeusz Ossowski:
Ab initio study of the mechanism of singlet-dioxygen addition to hydroxyaromatic compounds: Negative evidence for the involvement of peroxa and endoperoxide intermediates.
Journal of Computational Chemistry 23(11): 1076-1089 (2002) |
14 | EE | Rajmund Kazmierkiewicz,
Adam Liwo,
Harold A. Scheraga:
Energy-based reconstruction of a protein backbone from its -carbon trace by a Monte-Carlo method.
Journal of Computational Chemistry 23(7): 715-723 (2002) |
2000 |
13 | EE | Adam Liwo,
Jaroslaw Pillardy,
Cezary Czaplewski,
Jooyoung Lee,
Daniel R. Ripoll,
Malgorzata Groth,
Sylwia Rodziewicz-Motowidlo,
Rajmund Kazmierkiewicz,
Ryszard J. Wawak,
Stanislaw Oldziej,
Harold A. Scheraga:
UNRES: a united-residue force field for energy-based prediction of protein structure - orgin and significance of multibody terms.
RECOMB 2000: 193-200 |
1998 |
12 | EE | Adam Liwo,
Rajmund Kazmierkiewicz,
Cezary Czaplewski,
Malgorzata Groth,
Stanislaw Oldziej,
Ryszard J. Wawak,
Shelly Rackovsky,
Matthew R. Pincus,
Harold A. Scheraga:
United-residue force field for off-lattice protein-structure simulations: III. Origin of backbone hydrogen-bonding cooperativity in united-residue potentials.
Journal of Computational Chemistry 19(3): 259-276 (1998) |
1997 |
11 | EE | Adam Liwo,
Piotr Skurski,
Stanislaw Oldziej,
Leszek Lankiewicz,
Joanna Malicka,
Wieslaw Wiczk:
A New Approach to the Resolution of the Excitation-emission Spectra of Multicomponent Systems.
Computers & Chemistry 21(2): 89-95 (1997) |
10 | EE | Adam Liwo,
Dariusz Dyl,
Danuta Jeziorek,
Magorzata Nowacka,
Tadeusz Ossowski,
Wiesaw Wonicki:
MCSCF study of singlet oxygen addition to ethenol - a model of photooxidation reactions of unsaturated and aromatic compounds bearing hydroxy groups.
Journal of Computational Chemistry 18(13): 1668-1681 (1997) |
9 | EE | Adam Liwo,
Stanislaw Oldziej,
Matthew R. Pincus,
Ryszard J. Wawak,
Shelly Rackovsky,
Harold A. Scheraga:
A united-residue force field for off-lattice protein-structure simulations. I. Functional forms and parameters of long-range side-chain interaction potentials from protein crystal data.
Journal of Computational Chemistry 18(7): 849-873 (1997) |
8 | EE | Adam Liwo,
Matthew R. Pincus,
Ryszard J. Wawak,
Shelly Rackovsky,
Stanislaw Oldziej,
Harold A. Scheraga:
A united-residue force field for off-lattice protein-structure simulations. II. Parameterization of short-range interactions and determination of weights of energy terms by Z-score optimization.
Journal of Computational Chemistry 18(7): 874-887 (1997) |
1995 |
7 | | Daniel R. Ripoll,
Marcia S. Pottle,
Kenneth D. Gibson,
Harold A. Scheraga,
Adam Liwo:
Implementation of the ECEPP Algorithm, the Monte Carlo Minimization Method, and the Electrostatically Driven Monte Carlo Method on the Kendall Square Research KSR1 Computer.
Journal of Computational Chemistry 16(9): 1153-1163 (1995) |
1993 |
6 | | Monika Tarnowska,
Adam Liwo,
Mark D. Shenderovich,
Inta Liepina,
Alexander Golbraikh,
Zbigniew Grzonka,
Anna Tempczyk:
A molecular mechanics study of the effect of substitution in position 1 on the conformational space of the oxytocin/vasopressin ring.
Journal of Computer-Aided Molecular Design 7(6): 699-720 (1993) |
1992 |
5 | EE | Adam Liwo,
Monika Tarnowska,
Zbigniew Grzonka,
Anna Tempczyk:
Modified Free-Wilson Method for the Analysis of Biological Activity Data.
Computers & Chemistry 16(1): 1-9 (1992) |
1988 |
4 | EE | Jaroslaw Kostrowicki,
Adam Liwo,
Krzysztof Sokolowski:
A comparative study on some methods for computing equilibrium concentrations.
Computers & Chemistry 12(4): 293-299 (1988) |
1987 |
3 | EE | Jaroslaw Kostrowicki,
Adam Liwo:
A general method for the determination of the stoichiometry of unknown species in multicomponent systems from physicochemical measurements.
Computers & Chemistry 11(3): 195-210 (1987) |
1984 |
2 | EE | Jaroslaw Kostrowicki,
Adam Liwo:
DECFAM - A new computer oriented algorithm for the determination of equilibrium constants from potentiometric and/or spectrophotometric measurements - II: Methods based on analytical expressions.
Computers & Chemistry 8(2): 101-105 (1984) |
1 | EE | Jaroslaw Kostrowicki,
Adam Liwo:
DECFAM - A new computer oriented algorithm for the determination of equilibrium constants from potentionmetric and/or spectrophotometric measurements - I: Basic principles of the method and calculations of equilibrium concentrations.
Computers & Chemistry 8(2): 91-99 (1984) |