2004 |
10 | EE | Mitsunori Takano,
Junichi Higo,
Hironori K. Nakamura,
Masaki Sasai:
On the model granularity to simulate protein dynamics: A biological physics view on biomolecular computing.
Natural Computing 3(4): 377-393 (2004) |
2003 |
9 | EE | Kazuyoshi Ikeda,
Oxana V. Galzitskaya,
Haruki Nakamura,
Junichi Higo:
beta-Hairpins, alpha-helices, and the intermediates among the secondary structures in the energy landscape of a peptide from a distal beta-hairpin of SH3 domain.
Journal of Computational Chemistry 24(3): 310-318 (2003) |
2002 |
8 | EE | Junichi Higo,
Masayoshi Nakasako:
Hydration structure of human lysozyme investigated by molecular dynamics simulation and cryogenic X-ray crystal structure analyses: On the correlation between crystal water sites, solvent density, and solvent dipole.
Journal of Computational Chemistry 23(14): 1323-1336 (2002) |
7 | EE | Satoshi Ono,
Masataka Kuroda,
Junichi Higo,
Nobuyuki Nakajima,
Haruki Nakamura:
Calibration of force-field dependency in free energy landscapes of peptide conformations by quantum chemical calculations.
Journal of Computational Chemistry 23(4): 470-476 (2002) |
2001 |
6 | EE | Narutoshi Kamiya,
Junichi Higo:
Repeated-annealing sampling combined with multicanonical algorithm for conformational sampling of bio-molecules.
Journal of Computational Chemistry 22(10): 1098-1106 (2001) |
5 | EE | Junichi Higo,
Yasunobu Sugimoto,
Katsuzo Wakabayashi,
Haruki Nakamura:
Collective motions of myosin head derived from backbone molecular dynamics and combination with X-ray solution scattering data.
Journal of Computational Chemistry 22(16): 1983-1994 (2001) |
2000 |
4 | EE | Satoshi Ono,
Nobuyuki Nakajima,
Junichi Higo,
Haruki Nakamura:
Peptide free-energy profile is strongly dependent on the force field: Comparison of C96 and AMBER95.
Journal of Computational Chemistry 21(9): 748-762 (2000) |
1996 |
3 | EE | Shigeru Endo,
Junichi Higo,
Kuniaki Nagayama,
Hiroshi Wako:
New implementation of and the modeling by the extended simulated annealing process to structures of T4 lysozyme mutants at the 86th residue.
Journal of Computational Chemistry 17(4): 476-488 (1996) |
1994 |
2 | | Junichi Higo,
Mariko Yamaki,
Michiru Hogyoku,
Takuya Takahashi,
Shigeru Endo,
Kuniaki Nagayama:
Stability of Two-Dimensional Crystalline Aggregates of a PRotein Studied by Molecular Dynamics.
Journal of Computational Chemistry 15(11): 1278-1290 (1994) |
1 | | Junichi Higo,
Shigeru Endo,
Kuniaki Nagayama,
Tomoyoshi Ito,
Toshiyuki Fukushige,
Toshikazu Ebisuzaki,
Daiichiro Sugimoto,
Hiroo Miyagawa,
Kunihiro Kitamura,
Junichiro Makino:
Application of a High-Performance, Special-Purpose Computer, GRAPE-2A, to Molecular Dynamics.
Journal of Computational Chemistry 15(12): 1372-1376 (1994) |