David E. Bernholdt

2008
32	EE	Aniruddha G. Shet, Wael R. Elwasif, Robert J. Harrison, David E. Bernholdt: Programmability of the HPCS Languages: A case study with a quantum chemistry kernel. IPDPS 2008: 1-8
31	EE	Aniruddha G. Shet, P. Sadayappan, David E. Bernholdt, Jarek Nieplocha, Vinod Tipparaju: A framework for characterizing overlap of communication and computation in parallel applications. Cluster Computing 11(1): 75-90 (2008)
2007
30	EE	David E. Bernholdt, Shishir Bharathi, David Brown, Kasidit Chanchio, Meili Chen, Ann L. Chervenak, Luca Cinquini, Bob Drach, Ian T. Foster, Peter Fox, Jose Garcia, Carl Kesselman, Rob S. Markel, Don Middleton, Veronika Nefedova, Line Pouchard, Arie Shoshani, Alex Sim, Gary Strand, Dean Williams: The Earth System Grid: Supporting the Next Generation of Climate Modeling Research CoRR abs/0712.2262: (2007)
29	EE	David E. Bernholdt: Special Issue: Component and Framework Technology in High-Performance and Scientific Computing. Concurrency and Computation: Practice and Experience 19(5): 571-572 (2007)
2006
28	EE	Aniruddha G. Shet, P. Sadayappan, David E. Bernholdt, Jarek Nieplocha, Vinod Tipparaju: A Performance Instrumentation Framework to Characterize Computation-Communication Overlap in Message-Passing Systems. CLUSTER 2006
27	EE	Albert Hartono, Qingda Lu, Xiaoyang Gao, Sriram Krishnamoorthy, Marcel Nooijen, Gerald Baumgartner, David E. Bernholdt, Venkatesh Choppella, Russell M. Pitzer, J. Ramanujam, Atanas Rountev, P. Sadayappan: Identifying Cost-Effective Common Subexpressions to Reduce Operation Count in Tensor Contraction Evaluations. International Conference on Computational Science (1) 2006: 267-275
26	EE	Ann L. Chervenak, Jennifer M. Schopf, Laura Pearlman, Mei-Hui Su, Shishir Bharathi, Luca Cinquini, Mike D'Arcy, Neill Miller, David E. Bernholdt: Monitoring the Earth System Grid with MDS4. e-Science 2006: 69
25	EE	Felipe Bertrand, Randall Bramley, David E. Bernholdt, James Arthur Kohl, Alan Sussman, Jay W. Larson, Kostadin Damevski: Data redistribution and remote method invocation for coupled components. J. Parallel Distrib. Comput. 66(7): 931-946 (2006)
24	EE	Christian Engelmann, Stephen L. Scott, David E. Bernholdt, Narasimha Raju Gottumukkala, Chokchai Leangsuksun, Jyothish Varma, Chao Wang, Frank Mueller, Aniruddha G. Shet, P. Sadayappan: MOLAR: adaptive runtime support for high-end computing operating and runtime systems. Operating Systems Review 40(2): 63-72 (2006)
2005
23	EE	M. L. Chen, Al Geist, David E. Bernholdt, Kasidit Chanchio, D. L. Million: The Design and Prototype of RUDA, a Distributed Grid Accounting System. ICCSA (3) 2005: 29-38
22	EE	Felipe Bertrand, Randall Bramley, Alan Sussman, David E. Bernholdt, James Arthur Kohl, Jay W. Larson, Kostadin Damevski: Data Redistribution and Remote Method Invocation in Parallel Component Architectures. IPDPS 2005
21	EE	Albert Hartono, Alexander Sibiryakov, Marcel Nooijen, Gerald Baumgartner, David E. Bernholdt, So Hirata, Chi-Chung Lam, Russell M. Pitzer, J. Ramanujam, P. Sadayappan: Automated Operation Minimization of Tensor Contraction Expressions in Electronic Structure Calculations. International Conference on Computational Science (1) 2005: 155-164
20	EE	Wael R. Elwasif, Donald B. Batchelor, David E. Bernholdt, Lee A. Berry, Eduardo F. D'Azevedo, Wayne A. Houlberg, E. F. Jaeger, James Arthur Kohl, Shuhui Li: Coupled Fusion Simulation Using the Common Component Architecture. International Conference on Computational Science (1) 2005: 372-379
19	EE	Line Pouchard, Andrew Woolf, David E. Bernholdt: Data Grid discovery and Semantic Web technologies for the earth sciences. Int. J. on Digital Libraries 5(2): 72-83 (2005)
2004
18	EE	Boyana Norris, Jaideep Ray, Robert C. Armstrong, Lois C. McInnes, David E. Bernholdt, Wael R. Elwasif, Allen D. Malony, Sameer Shende: Computational Quality of Service for Scientific Components. CBSE 2004: 264-271
17	EE	David E. Bernholdt: High-Performance Parallel and Distributed Scientific Computing with the Common Component Architecture. International Conference on Computational Science 2004: 1
2003
16	EE	Line Pouchard, Luca Cinquini, Bob Drach, Don Middleton, David E. Bernholdt, Kasidit Chanchio, Ian T. Foster, Veronika Nefedova, David Brown, Peter Fox, Jose Garcia, Gary Strand, Dean Williams, Ann L. Chervenak, Carl Kesselman, Arie Shoshani, Alex Sim: An Ontology for Scientific Information in a Grid Environment: the Earth System Grid. CCGRID 2003: 626-632
15	EE	Sandhya Krishnan, Sriram Krishnamoorthy, Gerald Baumgartner, Daniel Cociorva, Chi-Chung Lam, P. Sadayappan, J. Ramanujam, David E. Bernholdt, Venkatesh Choppella: Data Locality Optimization for Synthesis of Efficient Out-of-Core Algorithms. HiPC 2003: 406-417
14	EE	Alina Bibireata, Sandhya Krishnan, Gerald Baumgartner, Daniel Cociorva, Chi-Chung Lam, P. Sadayappan, J. Ramanujam, David E. Bernholdt, Venkatesh Choppella: Memory-Constrained Data Locality Optimization for Tensor Contractions. LCPC 2003: 93-108
2002
13	EE	Gerald Baumgartner, David E. Bernholdt, Daniel Cociorva, Chi-Chung Lam, J. Ramanujam, Robert J. Harrison, Marcel Nooijen, P. Sadayappan: A Performance Optimization Framework for Compilation of Tensor Contraction Expressions into Parallel Programs. IPDPS 2002
12	EE	Daniel Cociorva, Gerald Baumgartner, Chi-Chung Lam, P. Sadayappan, J. Ramanujam, Marcel Nooijen, David E. Bernholdt, Robert J. Harrison: Space-Time Trade-Off Optimization for a Class of Electronic Structure Calculations. PLDI 2002: 177-186
11	EE	David E. Bernholdt, Wael R. Elwasif, James Arthur Kohl: Communication Infrastructure in High-Performance Component-Based Scientific Computing. PVM/MPI 2002: 260-270
10	EE	Gerald Baumgartner, David E. Bernholdt, Daniel Cociorva, Robert J. Harrison, So Hirata, Chi-Chung Lam, Marcel Nooijen, Russell M. Pitzer, J. Ramanujam, P. Sadayappan: A high-level approach to synthesis of high-performance codes for quantum chemistry. SC 2002: 1-10
9		Benjamin A. Allan, Robert C. Armstrong, Alicia P. Wolfe, Jaideep Ray, David E. Bernholdt, James Arthur Kohl: The CCA core specification in a distributed memory SPMD framework. Concurrency and Computation: Practice and Experience 14(5): 323-345 (2002)
8	EE	Meenakshi A. Kandaswamy, Mahmut T. Kandemir, Alok N. Choudhary, David E. Bernholdt: An Experimental Evaluation of I/O Optimizations on Different Applications. IEEE Trans. Parallel Distrib. Syst. 13(12): 1303-1319 (2002)
7	EE	Meenakshi A. Kandaswamy, Mahmut T. Kandemir, Alok N. Choudhary, David E. Bernholdt: An Experimental Evaluation of I/O Optimizations on Different Applications. IEEE Trans. Parallel Distrib. Syst. 13(7): 728-744 (2002)
2001
6	EE	Daniel Cociorva, J. W. Wilkins, Gerald Baumgartner, P. Sadayappan, J. Ramanujam, Marcel Nooijen, David E. Bernholdt, Robert J. Harrison: Towards Automatic Synthesis of High-Performance Codes for Electronic Structure Calculations: Data Locality Optimization. HiPC 2001: 237-248
5	EE	Wael R. Elwasif, David E. Bernholdt, James Arthur Kohl, G. A. Geist II: An Architecture for a Multi-threaded Harness Kernel. PVM/MPI 2001: 126-134
2000
4		David E. Bernholdt: Scalability of correlated electronic structure calculations on parallel computers: A case study of the RI-MP2 method. Parallel Computing 26(7-8): 945-963 (2000)
1998
3	EE	Meenakshi A. Kandaswamy, Mahmut T. Kandemir, Alok N. Choudhary, David E. Bernholdt: Performance Implications of Architectural and Software Techniques on I/O-Intensive Applications. ICPP 1998: 493-
1996
2	EE	Robert J. Harrison, Martyn F. Guest, Ricky A. Kendall, David E. Bernholdt, Adrian T. Wong, Mark Stave, James L. Anchell, Anthony C. Hess, Rik J. Littlefield, George L. Fann, Jarek Nieplocha, Greg S. Thomas, David Elwood, Jeffrey L. Tilson, Ron L. Shepard, Albert F. Wagner, Ian T. Foster, Ewing L. Lusk, Rick Stevens: Toward high-performance computational chemistry: II. A scalable self-consistent field program. Journal of Computational Chemistry 17(1): 124-132 (1996)
1995
1		Martyn F. Guest, Edoardo Aprà, David E. Bernholdt, Herbert A. Früchtl, Robert J. Harrison, Ricky A. Kendall, R. A. Kutteh, X. Long, John B. Nicholas, J. A. Nicholas, H. L. Tylor, Adrian T. Wong, G. J. Fann, Richard J. Littlefield, Jarek Nieplocha: High Performance Computational Chemistry: NWChem and Fully Distributed Parallel Applications. PARA 1995: 278-294

Coauthor Index

1	Benjamin A. Allan	[9]
2	James L. Anchell	[2]
3	Edoardo Aprà	[1]
4	Robert C. Armstrong	[9] [18]
5	Donald B. Batchelor	[20]
6	Gerald Baumgartner	[6] [10] [12] [13] [14] [15] [21] [27]
7	Lee A. Berry	[20]
8	Felipe Bertrand	[22] [25]
9	Shishir Bharathi	[26] [30]
10	Alina Bibireata	[14]
11	Randall Bramley	[22] [25]
12	David Brown	[16] [30]
13	Kasidit Chanchio	[16] [23] [30]
14	M. L. Chen	[23]
15	Meili Chen	[30]
16	Ann L. Chervenak	[16] [26] [30]
17	Venkatesh Choppella	[14] [15] [27]
18	Alok N. Choudhary	[3] [7] [8]
19	Luca Cinquini	[16] [26] [30]
20	Daniel Cociorva	[6] [10] [12] [13] [14] [15]
21	Mike D'Arcy	[26]
22	Eduardo F. D'Azevedo	[20]
23	Kostadin Damevski	[22] [25]
24	Bob Drach	[16] [30]
25	Wael R. Elwasif	[5] [11] [18] [20] [32]
26	David Elwood	[2]
27	Christian Engelmann	[24]
28	G. J. Fann	[1]
29	George L. Fann	[2]
30	Ian T. Foster	[2] [16] [30]
31	Peter Fox	[16] [30]
32	Herbert A. Früchtl	[1]
33	Xiaoyang Gao	[27]
34	Jose Garcia	[16] [30]
35	Al Geist (G. A. Geist II)	[5] [23]
36	Narasimha Raju Gottumukkala	[24]
37	Martyn F. Guest	[1] [2]
38	Robert J. Harrison	[1] [2] [6] [10] [12] [13] [32]
39	Albert Hartono	[21] [27]
40	Anthony C. Hess	[2]
41	So Hirata	[10] [21]
42	Wayne A. Houlberg	[20]
43	E. F. Jaeger	[20]
44	Meenakshi A. Kandaswamy	[3] [7] [8]
45	Mahmut T. Kandemir	[3] [7] [8]
46	Ricky A. Kendall	[1] [2]
47	Carl Kesselman	[16] [30]
48	James Arthur Kohl	[5] [9] [11] [20] [22] [25]
49	Sriram Krishnamoorthy	[15] [27]
50	Sandhya Krishnan	[14] [15]
51	R. A. Kutteh	[1]
52	Chi-Chung Lam	[10] [12] [13] [14] [15] [21]
53	Jay W. Larson	[22] [25]
54	Chokchai Leangsuksun (Box Leangsuksun)	[24]
55	Shuhui Li	[20]
56	Richard J. Littlefield	[1]
57	Rik J. Littlefield	[2]
58	X. Long	[1]
59	Qingda Lu	[27]
60	Ewing L. Lusk	[2]
61	Allen D. Malony	[18]
62	Rob S. Markel	[30]
63	Lois C. McInnes	[18]
64	Don Middleton	[16] [30]
65	Neill Miller	[26]
66	D. L. Million	[23]
67	Frank Mueller	[24]
68	Veronika Nefedova	[16] [30]
69	J. A. Nicholas	[1]
70	John B. Nicholas	[1]
71	Jarek Nieplocha	[1] [2] [28] [31]
72	Marcel Nooijen	[6] [10] [12] [13] [21] [27]
73	Boyana Norris	[18]
74	Laura Pearlman	[26]
75	Russell M. Pitzer	[10] [21] [27]
76	Line Pouchard	[16] [19] [30]
77	J. Ramanujam	[6] [10] [12] [13] [14] [15] [21] [27]
78	Jaideep Ray	[9] [18]
79	Atanas Rountev	[27]
80	P. Sadayappan	[6] [10] [12] [13] [14] [15] [21] [24] [27] [28] [31]
81	Jennifer M. Schopf	[26]
82	Stephen L. Scott	[24]
83	Sameer Shende	[18]
84	Ron L. Shepard	[2]
85	Aniruddha G. Shet	[24] [28] [31] [32]
86	Arie Shoshani	[16] [30]
87	Alexander Sibiryakov	[21]
88	Alex Sim	[16] [30]
89	Mark Stave	[2]
90	Rick L. Stevens (Rick Stevens)	[2]
91	Gary Strand	[16] [30]
92	Mei-Hui Su	[26]
93	Alan Sussman	[22] [25]
94	Greg S. Thomas	[2]
95	Jeffrey L. Tilson	[2]
96	Vinod Tipparaju	[28] [31]
97	H. L. Tylor	[1]
98	Jyothish Varma	[24]
99	Albert F. Wagner	[2]
100	Chao Wang	[24]
101	J. W. Wilkins	[6]
102	Dean Williams	[16] [30]
103	Alicia P. Wolfe	[9]
104	Adrian T. Wong	[1] [2]
105	Andrew Woolf	[19]